RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 EXOSC8Q96B26 276 aaKnown RBP13.17□□□□□ -0.3
MINDY4-202ENST00000409881 LRR1Q96L50 414 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 SORCS2Q96PQ0 1159 aa13.17□□□□□ -0.3
MINDY4-202ENST00000409881 RANBP3Q9H6Z4 567 aaPredicted RBP13.17□□□□□ -0.3
MINDY4-202ENST00000409881 ARRDC5A6NEK1 342 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 C9orf172C9J069 976 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
MINDY4-202ENST00000409881 MPC2O95563 127 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 PRKACAP17612 351 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 HK1P19367 917 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 CXCL3P19876 107 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 SLC6A1P30531 599 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 RPL3P39023 403 aaKnown RBP13.16□□□□□ -0.3
MINDY4-202ENST00000409881 C21orf58P58505 322 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 GABREP78334 506 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 DCDP81605 110 aaKnown RBP13.16□□□□□ -0.3
MINDY4-202ENST00000409881 ERV3-1Q14264 604 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 GRK1Q15835 563 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 NKAIN1Q4KMZ8 207 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 KLHL12Q53G59 568 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 SYT14P1Q58G82 188 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 BICRALQ6AI39 1079 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 METAP1DQ6UB28 335 aaPredicted RBP13.16□□□□□ -0.3
MINDY4-202ENST00000409881 TMPRSS7Q7RTY8 843 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 TMEM52Q8NDY8 209 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 UFD1Q92890 307 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 FAM122AQ96E09 287 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 ZPBPQ9BS86 351 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 LIN7BQ9HAP6 207 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 ATP6V1HQ9UI12 483 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 SEC16AO15027 2179 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 CYR61O00622 381 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 BET1O15155 118 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 B4GALT2O60909 372 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 SEMA7AO75326 666 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 STK17BO94768 372 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 IFNA14P01570 189 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 HOXD4P09016 255 aaPredicted RBP13.16□□□□□ -0.3
MINDY4-202ENST00000409881 ELAVL4P26378 380 aaKnown RBP13.16□□□□□ -0.3
MINDY4-202ENST00000409881 STOMP27105 288 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 RORAP35398 523 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 SOAT1P35610 550 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 ZNF81P51508 661 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 PDE7AQ13946 482 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 OCLNQ16625 522 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 PRSS53Q2L4Q9 553 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 DCST1Q5T197 706 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
MINDY4-202ENST00000409881 TMED9Q9BVK6 235 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 FOXJ2Q9P0K8 574 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 TESQ9UGI8 421 aaKnown RBP13.16□□□□□ -0.3
MINDY4-202ENST00000409881 KCND3Q9UK17 655 aa13.16□□□□□ -0.3
MINDY4-202ENST00000409881 A0A1B0GVC2 190 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 A6NIN4 97 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 ERAL1O75616 437 aaKnown RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 SERPINI2O75830 405 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 CFDP00746 253 aaPredicted RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 BTG1P62324 171 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 ELOAQ14241 798 aaKnown RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 LGALSLQ3ZCW2 172 aaPredicted RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 ZNF385CQ66K41 422 aaPredicted RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 SLC48A1Q6P1K1 146 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 COX15Q7KZN9 410 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 GPALPP1Q8IXQ4 340 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 PRSS58Q8IYP2 241 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 ADAMTS18Q8TE60 1221 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 RIT1Q92963 219 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 MR1Q95460 341 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 ZNF582Q96NG8 517 aaPredicted RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 C1QTNF6Q9BXI9 259 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 TMEM38AQ9H6F2 299 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 SLC22A11Q9NSA0 550 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 NUDT15Q9NV35 164 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 CTSFQ9UBX1 484 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 MRPS33Q9Y291 106 aaKnown RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 C2orf92A0A1B0GVN3 265 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 KLK3P07288 261 aaPredicted RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 ELK1P19419 428 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 ATP12AP54707 1039 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 PCBP3P57721 371 aaKnown RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 ID2Q02363 134 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 BTN1A1Q13410 526 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 TPBGQ13641 420 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 PLA1AQ53H76 456 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 CLLU1Q5K131 121 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 ARSKQ6UWY0 536 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 OR4N5Q8IXE1 308 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 ABCG5Q9H222 651 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 AKIRIN1Q9H9L7 192 aaPredicted RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 MRPL39Q9NYK5 338 aaKnown RBP13.15□□□□□ -0.3
MINDY4-202ENST00000409881 EXTL2Q9UBQ6 330 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 UBQLN2Q9UHD9 624 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 MGAT4BQ9UQ53 548 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 FER1L5A0AVI2 2057 aa13.15□□□□□ -0.3
MINDY4-202ENST00000409881 PIEZO1Q92508 2521 aa13.14□□□□□ -0.31
MINDY4-202ENST00000409881 PCP4L1A6NKN8 68 aa13.14□□□□□ -0.31
MINDY4-202ENST00000409881 LDB3O75112 727 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms