RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 WDFY2Q96P53 400 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 SDHCQ99643 169 aaPredicted RBP18.41■□□□□ 0.54
USP39-204ENST00000409766 NRSN2Q9GZP1 204 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 ASB6Q9NWX5 421 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 ZNF337Q9Y3M9 751 aa18.41■□□□□ 0.54
USP39-204ENST00000409766 GTPBP1O00178 669 aaKnown RBP18.4■□□□□ 0.54
USP39-204ENST00000409766 GYPBP06028 91 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 PNMTP11086 282 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 PNLIPP16233 465 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 MST1P26927 711 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 RANBP1P43487 201 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 RPS4XP62701 263 aaKnown RBP18.4■□□□□ 0.54
USP39-204ENST00000409766 GPR50Q13585 617 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 ART5Q96L15 291 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 HDHD5Q9BXW7 423 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 ATXN7L1Q9ULK2 861 aaPredicted RBP18.4■□□□□ 0.54
USP39-204ENST00000409766 IER3IP1Q9Y5U9 82 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 TNRC6BQ9UPQ9 1833 aaKnown RBP18.4■□□□□ 0.54
USP39-204ENST00000409766 SLC35F4A4IF30 521 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 HTR3EA5X5Y0 456 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 ELOA3DA6NLF2 546 aaPredicted RBP18.4■□□□□ 0.54
USP39-204ENST00000409766 ICOSLGO75144 302 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 IGF2P01344 180 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 MRPL3P09001 348 aaKnown RBP18.4■□□□□ 0.54
USP39-204ENST00000409766 LCN1P31025 176 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 CCR4P51679 360 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 ELOA3BQ3SY89 546 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 DPY19L2P2Q6ZN68 376 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 LAX1Q8IWV1 398 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 SDR9C7Q8NEX9 313 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 ELOA3Q8NG57 546 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 OR1N1Q8NGS0 311 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 OR4K13Q8NH42 304 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 ZNF524Q96C55 264 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 TMEM43Q9BTV4 400 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 DUSP23Q9BVJ7 150 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 RTN4RQ9BZR6 473 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 CTSFQ9UBX1 484 aa18.4■□□□□ 0.54
USP39-204ENST00000409766 CDC14CA4D256 554 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 GABRPO00591 440 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 TO15178 435 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 HNRNPCP07910 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
USP39-204ENST00000409766 GALP22466 123 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 SQSTM1Q13501 440 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 COX15Q7KZN9 410 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 WWTR1Q9GZV5 400 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 SLC22A11Q9NSA0 550 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 KLHL21Q9UJP4 597 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 ADAM18Q9Y3Q7 739 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 CMAHPQ9Y471 501 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 SIRT4Q9Y6E7 314 aaPredicted RBP18.39■□□□□ 0.53
USP39-204ENST00000409766 LY6G6EA0A0G2JKS1 128 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 TSPAN2O60636 221 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 NR0B1P51843 470 aaKnown RBP18.39■□□□□ 0.53
USP39-204ENST00000409766 PMS2CLQ68D20 193 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 RHBDD2Q6NTF9 364 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 GUSBP11Q6P575 273 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 FAM98AQ8NCA5 519 aaKnown RBP18.39■□□□□ 0.53
USP39-204ENST00000409766 GALNT6Q8NCL4 622 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 PLPP5Q8NEB5 264 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 SMPDL3BQ92485 455 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 KLHDC3Q9BQ90 382 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 LAT2Q9GZY6 243 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 SP140LQ9H930 580 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 NRIP3Q9NQ35 241 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 COPS7AQ9UBW8 275 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 SRPK3Q9UPE1 567 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 TRAPPC4Q9Y296 219 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 U3KQA8 63 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 V9GYH0 126 aa18.39■□□□□ 0.53
USP39-204ENST00000409766 A0A1B0GTQ1 180 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 ARPC3O15145 178 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 RNF13O43567 381 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 RPL4P36578 427 aaKnown RBP18.38■□□□□ 0.53
USP39-204ENST00000409766 ZNF85Q03923 595 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 POU4F2Q12837 409 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 INSL4Q14641 139 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 GXYLT1Q4G148 440 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 HLA-DQA1Q5Y7H0 255 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 TMEM91Q6ZNR0 172 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 LANCL3Q6ZV70 420 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 SAP25Q8TEE9 199 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 LIPHQ8WWY8 451 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 RNF31Q96EP0 1072 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 CCDC32Q9BV29 185 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 TGIF2Q9GZN2 237 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 TRIM36Q9NQ86 728 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 ZMIZ1Q9ULJ6 1067 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 POLHQ9Y253 713 aa18.38■□□□□ 0.53
USP39-204ENST00000409766 CPED1A4D0V7 1026 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 MT-ND5P03915 603 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 IL12BP29460 328 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 PRPS1P60891 318 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 CDC20Q12834 499 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 NR0B2Q15466 257 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 ZNF74Q16587 644 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 ISXQ2M1V0 245 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 FAAH2Q6GMR7 532 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 MARCH9Q86YJ5 346 aa18.37■□□□□ 0.53
USP39-204ENST00000409766 POC5Q8NA72 575 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms