RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 LILRB4Q8NHJ6 448 aa18.18■□□□□ 0.5
PTCD3-202ENST00000409326 INTS12Q96CB8 462 aaKnown RBP18.18■□□□□ 0.5
PTCD3-202ENST00000409326 ARL5BQ96KC2 179 aa18.18■□□□□ 0.5
PTCD3-202ENST00000409326 MCHR1Q99705 422 aa18.18■□□□□ 0.5
PTCD3-202ENST00000409326 PRRG4Q9BZD6 226 aa18.18■□□□□ 0.5
PTCD3-202ENST00000409326 PCDHAC1Q9H158 963 aa18.18■□□□□ 0.5
PTCD3-202ENST00000409326 C1orf21Q9H246 121 aa18.18■□□□□ 0.5
PTCD3-202ENST00000409326 ADPRHL2Q9NX46 363 aa18.18■□□□□ 0.5
PTCD3-202ENST00000409326 ZNF629Q9UEG4 869 aaPredicted RBP18.18■□□□□ 0.5
PTCD3-202ENST00000409326 SH3GLB1Q9Y371 365 aa18.18■□□□□ 0.5
PTCD3-202ENST00000409326 A0A0B4J2E0 115 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 A0A1B0GX12 115 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 ZC3H12DA2A288 527 aaKnown RBP18.17■□□□□ 0.5
PTCD3-202ENST00000409326 PMS2P2O95744 297 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 CLDN1O95832 211 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 IL18BPO95998 194 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 NCK1P16333 377 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 CSNK2A1P68400 391 aaPredicted RBP18.17■□□□□ 0.5
PTCD3-202ENST00000409326 ALG10BQ5I7T1 473 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 ZNF613Q6PF04 617 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 ULK3Q6PHR2 472 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 CBLL1Q75N03 491 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 LSRQ86X29 649 aaPredicted RBP18.17■□□□□ 0.5
PTCD3-202ENST00000409326 RBM45Q8IUH3 476 aaKnown RBP18.17■□□□□ 0.5
PTCD3-202ENST00000409326 LIX1LQ8IVB5 337 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 GCNT2Q8N0V5 402 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 LZICQ8WZA0 190 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 FAM162AQ96A26 154 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 TPD52L3Q96J77 140 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 SFXN3Q9BWM7 321 aa18.17■□□□□ 0.5
PTCD3-202ENST00000409326 A1L4Q6 167 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 ELOA3DA6NLF2 546 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-202ENST00000409326 FAM90A27PA6NNH2 459 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 A8MVM7 634 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 SULT2B1O00204 365 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 DVL2O14641 736 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 DNPH1O43598 174 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 SERPINA1P01009 418 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 CRHP06850 196 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 PNMTP11086 282 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 TCN1P20061 433 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-202ENST00000409326 TNFRSF1BP20333 461 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 OPRM1P35372 400 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 FOXF2Q12947 444 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 BNIP2Q12982 314 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 SLC25A35Q3KQZ1 300 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 ELOA3BQ3SY89 546 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 ENTPD8Q5MY95 495 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 SWT1Q5T5J6 900 aaKnown RBP18.16■□□□□ 0.5
PTCD3-202ENST00000409326 GLYATQ6IB77 296 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 ARHGAP24Q8N264 748 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 ELOA3Q8NG57 546 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 RNF128Q8TEB7 428 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 SLC38A4Q969I6 547 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 SLC47A1Q96FL8 570 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 POTEKPQ9BYX7 375 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 SELENONQ9NZV5 590 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 MAGEL2Q9UJ55 1249 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 TRAPPC4Q9Y296 219 aa18.16■□□□□ 0.5
PTCD3-202ENST00000409326 KLF2Q9Y5W3 355 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-202ENST00000409326 UTP20O75691 2785 aaKnown RBP18.16■□□□□ 0.5
PTCD3-202ENST00000409326 CPSF4LA6NMK7 179 aaKnown RBP18.15■□□□□ 0.5
PTCD3-202ENST00000409326 NPIPB7O75200 414 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 GMNNO75496 209 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 BMP5P22003 454 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 CEACAM7Q14002 265 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 GUSBP1Q15486 140 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 EEF1A1P5Q5VTE0 462 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 FCRLAQ7L513 359 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 MAMDC2Q7Z304 686 aaPredicted RBP18.15■□□□□ 0.5
PTCD3-202ENST00000409326 RELL2Q8NC24 303 aaPredicted RBP18.15■□□□□ 0.5
PTCD3-202ENST00000409326 STK35Q8TDR2 534 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 ROBO4Q8WZ75 1007 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 DNAJA3Q96EY1 480 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 GORASP2Q9H8Y8 452 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 TAS2R1Q9NYW7 299 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 RPS6KA6Q9UK32 745 aa18.15■□□□□ 0.5
PTCD3-202ENST00000409326 A0A087WUJ7 227 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 A0A1W2PNV4 684 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 SMAD9O15198 467 aaKnown RBP18.14■□□□□ 0.49
PTCD3-202ENST00000409326 TNFSF13O75888 250 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 ZNF682O95780 498 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 IMPDH2P12268 514 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 ENPP1P22413 925 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 IDUAP35475 653 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 OR1E2P47887 323 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 CDH12P55289 794 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 RNPS1Q15287 305 aaKnown RBP18.14■□□□□ 0.49
PTCD3-202ENST00000409326 GTF2IRD2BQ6EKJ0 949 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 VTCN1Q7Z7D3 282 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 GTF2IRD2Q86UP8 949 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 TSPYL5Q86VY4 417 aaPredicted RBP18.14■□□□□ 0.49
PTCD3-202ENST00000409326 ADAMTS16Q8TE57 1224 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 ZHX1-C8orf76Q96EF9 292 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 GMPPAQ96IJ6 420 aaPredicted RBP18.14■□□□□ 0.49
PTCD3-202ENST00000409326 UCK2Q9BZX2 261 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 POLR2J2Q9GZM3 115 aaKnown RBP18.14■□□□□ 0.49
PTCD3-202ENST00000409326 POLR2J3Q9H1A7 115 aaKnown RBP18.14■□□□□ 0.49
PTCD3-202ENST00000409326 GLRX2Q9NS18 164 aa18.14■□□□□ 0.49
PTCD3-202ENST00000409326 PRPF19Q9UMS4 504 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms