RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 POTEKPQ9BYX7 375 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 EMC3Q9P0I2 261 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 TMEM181Q9P2C4 612 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 PCDHB14Q9Y5E9 798 aa17.05■□□□□ 0.32
SMARCB1-204ENST00000407422 CLOCKO15516 846 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 COX5AP20674 150 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 MAGEA8P43361 318 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 H3F3AP84243 136 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 STK11Q15831 433 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 TTMPQ5BVD1 217 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 NCMAPQ5T1S8 102 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 YTHDF3Q7Z739 585 aaKnown RBP17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 CIARTQ8N365 385 aaPredicted RBP17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 TMEM19Q96HH6 336 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 Q96MF0 132 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 EBF4Q9BQW3 602 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 ADAM19Q9H013 955 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 PAIP1Q9H074 479 aaKnown RBP17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 TCF7L2Q9NQB0 619 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 TRAPPC4Q9Y296 219 aa17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 NOSIPQ9Y314 301 aaKnown RBP17.04■□□□□ 0.32
SMARCB1-204ENST00000407422 ZNF208O43345 1280 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 DNPH1O43598 174 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 INHBBP09529 407 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 NUDT7P0C024 238 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 ACAA2P42765 397 aaKnown RBP17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 PTH2RP49190 550 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 IDH3AP50213 366 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 CRISP3P54108 245 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 Q71RC1 249 aaPredicted RBP17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 CLIP4Q8N3C7 705 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 ZNF611Q8N823 705 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 PIGXQ8TBF5 258 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 LRRC8CQ8TDW0 803 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 NEUROG1Q92886 237 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 DDIT4LQ96D03 193 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 POM121Q96HA1 1249 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 ATP6V1G3Q96LB4 118 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 ESRP2Q9H6T0 727 aaKnown RBP17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 ZNF443Q9Y2A4 671 aaPredicted RBP17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 CHST2Q9Y4C5 530 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 RNF115Q9Y4L5 304 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 PLCE1Q9P212 2302 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 DPRXA6NFQ7 191 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 CNOT4O95628 575 aaKnown RBP17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 PRG2P13727 222 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 HOXB9P17482 250 aaPredicted RBP17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 ADSLP30566 484 aaPredicted RBP17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 SLC16A1P53985 500 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 BSPH1Q075Z2 132 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 LIN52Q52LA3 116 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 FBXW9Q5XUX1 488 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 PRSS57Q6UWY2 283 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 BIVMQ86UB2 503 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 FUNDC1Q8IVP5 155 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 UBE2J2Q8N2K1 259 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 ZNF433Q8N7K0 673 aaPredicted RBP17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 TMEM171Q8WVE6 324 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 MAL2Q969L2 176 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 APH1AQ96BI3 265 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 USB1Q9BQ65 265 aaKnown RBP17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 GSX2Q9BZM3 304 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 NGBQ9NPG2 151 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 CALML5Q9NZT1 146 aa17.03■□□□□ 0.32
SMARCB1-204ENST00000407422 CSPG4Q6UVK1 2322 aa17.02■□□□□ 0.32
SMARCB1-204ENST00000407422 POLR3GO15318 223 aaPredicted RBP17.02■□□□□ 0.31
SMARCB1-204ENST00000407422 CD3EP07766 207 aa17.02■□□□□ 0.31
SMARCB1-204ENST00000407422 UQCRBP14927 111 aa17.02■□□□□ 0.31
SMARCB1-204ENST00000407422 HOXB4P17483 251 aaPredicted RBP17.02■□□□□ 0.31
SMARCB1-204ENST00000407422 GGT1P19440 569 aa17.02■□□□□ 0.31
SMARCB1-204ENST00000407422 SLC35A1P78382 337 aa17.02■□□□□ 0.31
SMARCB1-204ENST00000407422 RGNQ15493 299 aa17.02■□□□□ 0.31
SMARCB1-204ENST00000407422 ZNF440Q8IYI8 595 aa17.02■□□□□ 0.31
SMARCB1-204ENST00000407422 SLAMF8Q9P0V8 285 aa17.02■□□□□ 0.31
SMARCB1-204ENST00000407422 LAMP3Q9UQV4 416 aa17.02■□□□□ 0.31
SMARCB1-204ENST00000407422 TRIM64A6NGJ6 449 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 TRIM64BA6NI03 449 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 CLIC1O00299 241 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 GPR171O14626 319 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 TGDSO95455 350 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 MRPL19P49406 292 aaKnown RBP17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 FOXG1P55316 489 aaPredicted RBP17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 STX1BP61266 288 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 BNIP2Q12982 314 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 PPA1Q15181 289 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 RNF220Q5VTB9 566 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 ADAM5Q6NVV9 412 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 CADM2Q8N3J6 435 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 KBTBD8Q8NFY9 601 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 ZNF701Q9NV72 531 aaPredicted RBP17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 SLC25A37Q9NYZ2 338 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 NPAP1Q9NZP6 1156 aa17.01■□□□□ 0.31
SMARCB1-204ENST00000407422 A0A0G2JPF8 293 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 HNRNPCL2B2RXH8 293 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 HNRNPCL3B7ZW38 293 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 H7C1Q1 480 aa17■□□□□ 0.31
SMARCB1-204ENST00000407422 EIF1BO60739 113 aaKnown RBP17■□□□□ 0.31
SMARCB1-204ENST00000407422 HNRNPCL1O60812 293 aaKnown RBP17■□□□□ 0.31
SMARCB1-204ENST00000407422 MRPL33O75394 65 aaKnown RBP17■□□□□ 0.31
SMARCB1-204ENST00000407422 RAD51DO75771 328 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms