RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ZNF146Q15072 292 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 SLC1A5Q15758 541 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 WSCD2Q2TBF2 565 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 RFTN2Q52LD8 501 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 SPANXN3Q5MJ09 141 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 EOGTQ5NDL2 527 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 C9orf64Q5T6V5 341 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 ARMC12Q5T9G4 340 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 STEAP4Q687X5 459 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 FAAP20Q6NZ36 180 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZNF343Q6P1L6 599 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 NLRP9Q7RTR0 991 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 CROCCP2Q86T23 111 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 TMEM135Q86UB9 458 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 STHQ8IWL8 128 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 OR4N5Q8IXE1 308 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 ABCA7Q8IZY2 2146 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 DNAAF3Q8N9W5 541 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZNF485Q8NCK3 441 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 OR52K1Q8NGK4 314 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 C8orf46Q8TAG6 207 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 BRSK1Q8TDC3 778 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 SSC4DQ8WTU2 575 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 PYROXD1Q8WU10 500 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 UBTD2Q8WUN7 234 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 PIH1D2Q8WWB5 315 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 OR8D1Q8WZ84 308 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 FAM3CQ92520 227 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 RAB7BQ96AH8 199 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 SLC45A3Q96JT2 553 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 MCCC1Q96RQ3 725 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 LYSMD1Q96S90 227 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 GABRG3Q99928 467 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 FICDQ9BVA6 458 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 KIFC1Q9BW19 673 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 ACAT2Q9BWD1 397 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 PINK1Q9BXM7 581 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 NUSAP1Q9BXS6 441 aaKnown RBP4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 TM6SF2Q9BZW4 377 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 CDC42EP4Q9H3Q1 356 aaKnown RBP4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 HEBP1Q9NRV9 189 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 FETUBQ9UGM5 382 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 SCML1Q9UN30 329 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 FOXA2Q9Y261 457 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 SNX5Q9Y5X3 404 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 PRSS21Q9Y6M0 314 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZDBF2Q9HCK1 2354 aa4.05□□□□□ -1.76
HMGB3P19-201ENST00000403971 TDRD6O60522 2096 aaKnown RBP4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 RALGAPA1Q6GYQ0 2036 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 CACNA1EQ15878 2313 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 IGHV3OR16-10A0A075B7F0 116 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 A0A0J9YYE9 177 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 IQCMA0A1B0GVH7 501 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 SH3PXD2BA1X283 911 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 RGSL1A5PLK6 1076 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRIM64A6NGJ6 449 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRIM64BA6NI03 449 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 A8MXK9 166 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 PSMD11O00231 422 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 RIPK2O43353 540 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 PI15O43692 258 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 VEGFDO43915 354 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 KERAO60938 352 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRBC1P01850 177 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 ADORA3P0DMS8 318 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 HLA-EP13747 358 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZNF30P17039 623 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 PGAM1P18669 254 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 UGT1A6P19224 532 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 OXTRP30559 389 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 PHBP35232 272 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 HMGCLP35914 325 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 ELK3P41970 407 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 GRIA1P42261 906 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 MAGEA9P43362 315 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 NDUFV3P56181 108 aaKnown RBP4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 NAB1Q13506 487 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 PDE7AQ13946 482 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 CASP8Q14790 479 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 PON2Q15165 354 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 TAF1AQ15573 450 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 UAP1Q16222 522 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 MS4A18Q3C1V0 323 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 SNAI3Q3KNW1 292 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 C2orf76Q3KRA6 126 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 FAM182AQ5T1J6 154 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 PAQR6Q6TCH4 344 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 C3orf62Q6ZUJ4 267 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 RAPH1Q70E73 1250 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 LMNTD2Q8IXW0 634 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZBED8Q8IZ13 594 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 IQCKQ8N0W5 287 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 STK40Q8N2I9 435 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 FBXO36Q8NEA4 188 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 OR2T3Q8NH03 318 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 OR4A16Q8NH70 328 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 SPPL2AQ8TCT8 520 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 MGARPQ8TDB4 240 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 DTX3LQ8TDB6 740 aa4.04□□□□□ -1.76
HMGB3P19-201ENST00000403971 GANCQ8TET4 914 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms