RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ANKRD34CP0C6C1 535 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 DNASE1P24855 282 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 SNTA1Q13424 505 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 RNASE12Q5GAN4 147 aaKnown RBP18.26■□□□□ 0.51
CCDC47-202ENST00000403162 USP53Q70EK8 1073 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 SLC38A6Q8IZM9 456 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 THAP4Q8WY91 577 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 NXPE2Q96DL1 559 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 SMIM19Q96E16 107 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 MS4A3Q96HJ5 214 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 CMTM3Q96MX0 182 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 GSDMCQ9BYG8 508 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 FBXL4Q9UKA2 621 aa18.26■□□□□ 0.51
CCDC47-202ENST00000403162 MRPS7Q9Y2R9 242 aaKnown RBP18.26■□□□□ 0.51
CCDC47-202ENST00000403162 A0A0B4J203 849 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 RPS10-NUDT3A0A1W2PQS6 291 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 TPD52L2O43399 206 aaKnown RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 PAK4O96013 591 aaPredicted RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 MT-ND4P03905 459 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 SYPP08247 313 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 UCHL1P09936 223 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 CPMP14384 443 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 SRP54P61011 504 aaKnown RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 SNRPNP63162 240 aaKnown RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 SNTB2Q13425 540 aaKnown RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 CLLU1Q5K131 121 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 ZNF613Q6PF04 617 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 OVCH1Q7RTY7 1134 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 DGLUCYQ7Z3D6 616 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 CYB561A3Q8NBI2 242 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 FAM98AQ8NCA5 519 aaKnown RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 SMAP2Q8WU79 429 aaPredicted RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 SERINC2Q96SA4 455 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 CLEC4MQ9H2X3 399 aaPredicted RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 CD93Q9NPY3 652 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 DUSP22Q9NRW4 184 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 C14orf105Q9NVL8 296 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 PEX12O00623 359 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 PLRG1O43660 514 aaKnown RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 PPP1R3DO95685 299 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 WNT1P04628 370 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 GDI2P50395 445 aaKnown RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 ADPRHP54922 357 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 ZXDAP98168 799 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 CDK5R1Q15078 307 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 TRMT12Q53H54 448 aaKnown RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 OR4N5Q8IXE1 308 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 SYS1Q8N2H4 156 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
CCDC47-202ENST00000403162 SLC43A2Q8N370 569 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 OR6C2Q9NZP2 312 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 HEBP2Q9Y5Z4 205 aa18.25■□□□□ 0.51
CCDC47-202ENST00000403162 ZNF749O43361 778 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 GATBO75879 557 aaKnown RBP18.24■□□□□ 0.51
CCDC47-202ENST00000403162 IFNGP01579 166 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 CD1AP06126 327 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 SMIM10L1P0DMW3 83 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 TYRP1P17643 537 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 ZNF81P51508 661 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 EPHA4P54764 986 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 SIM1P81133 766 aaPredicted RBP18.24■□□□□ 0.51
CCDC47-202ENST00000403162 EXOSC2Q13868 293 aaKnown RBP18.24■□□□□ 0.51
CCDC47-202ENST00000403162 FGFBP1Q14512 234 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 SUZ12Q15022 739 aaKnown RBP18.24■□□□□ 0.51
CCDC47-202ENST00000403162 UBE2NLQ5JXB2 153 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 ARHGAP11AQ6P4F7 1023 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 SEZ6L2Q6UXD5 910 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 TSTD1Q8NFU3 115 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 OR51A7Q8NH64 312 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 LRRC20Q8TCA0 184 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 FAM131CQ96AQ9 280 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 SMIM10Q96HG1 83 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 STACQ99469 402 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 ZNF559Q9BR84 538 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 DPCDQ9BVM2 203 aaPredicted RBP18.24■□□□□ 0.51
CCDC47-202ENST00000403162 C20orf85Q9H1P6 137 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 FBXO34Q9NWN3 711 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 PCDHGA9Q9Y5G4 932 aaKnown RBP18.24■□□□□ 0.51
CCDC47-202ENST00000403162 SSNA1O43805 119 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 MPC2O95563 127 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 SLC35G6P0C7Q6 338 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 TLX1P31314 330 aaPredicted RBP18.24■□□□□ 0.51
CCDC47-202ENST00000403162 TPMTP51580 245 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 ZP1P60852 638 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 ACTA2P62736 377 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 ACTG2P63267 376 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 RFLNBQ8N5W9 214 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 BEST4Q8NFU0 473 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 OR6C4Q8NGE1 309 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 PMM1Q92871 262 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 PELI1Q96FA3 418 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 UBQLN2Q9UHD9 624 aa18.24■□□□□ 0.51
CCDC47-202ENST00000403162 A0A087WV62 115 aa18.23■□□□□ 0.51
CCDC47-202ENST00000403162 TBC1D3DA0A087WVF3 549 aa18.23■□□□□ 0.51
CCDC47-202ENST00000403162 TBC1D3IA0A087WXS9 549 aa18.23■□□□□ 0.51
CCDC47-202ENST00000403162 NPIPA5A0A0B4J1W7 369 aa18.23■□□□□ 0.51
CCDC47-202ENST00000403162 OR5K3A6NET4 321 aa18.23■□□□□ 0.51
CCDC47-202ENST00000403162 TBC1D3LB9A6J9 549 aa18.23■□□□□ 0.51
CCDC47-202ENST00000403162 NPIPA7E9PJI5 369 aa18.23■□□□□ 0.51
CCDC47-202ENST00000403162 PEX14O75381 377 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms