RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 P2RY2P41231 377 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 SHC2P98077 582 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 PITPNAQ00169 270 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 DYRK1AQ13627 763 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 HTR4Q13639 388 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 ELAVL3Q14576 367 aaKnown RBP14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 SWI5Q1ZZU3 235 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 TMEM52BQ4KMG9 183 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 TMEM35AQ53FP2 167 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 PRAMEF8Q5VWM4 474 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 PRAMEF7Q5VXH5 474 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 CDC73Q6P1J9 531 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 SLC48A1Q6P1K1 146 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 NIPAL3Q6P499 406 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 TMPRSS9Q7Z410 1059 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 SLC16A11Q8NCK7 471 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 OR5W2Q8NH69 310 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 ADAMTS15Q8TE58 950 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 WFIKKN2Q8TEU8 576 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 RSPRY1Q96DX4 576 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 SEMA4CQ9C0C4 833 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 ANKRD19PQ9H560 264 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 GAREM1Q9H706 876 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 WDR26Q9H7D7 661 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 GPN3Q9UHW5 284 aaPredicted RBP14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 CES1P1Q9UKY3 287 aa14.77□□□□□ -0.05
CHMP1A-201ENST00000397901 CENPVL1A0A0U1RR11 272 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 CHURC1-FNTBB4DL54 471 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 PRKAR1BP31321 381 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 MPIP34949 423 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 E2F1Q01094 437 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 FGL2Q14314 439 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 ZIC1Q15915 447 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 SLC25A35Q3KQZ1 300 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 ZNF528Q3MIS6 628 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 FCRLBQ6BAA4 426 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 FAM111BQ6SJ93 734 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 ADAMTSL4Q6UY14 1074 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 CEACAM19Q7Z692 300 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 TRMT10AQ8TBZ6 339 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 GANCQ8TET4 914 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 CDS1Q92903 461 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 COL26A1Q96A83 441 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 MOAP1Q96BY2 351 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 OR52D1Q9H346 318 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 SLC6A20Q9NP91 592 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 MRPS30Q9NP92 439 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 TRIM36Q9NQ86 728 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 MED11Q9P086 117 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 KCNK6Q9Y257 313 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 ZNF443Q9Y2A4 671 aaPredicted RBP14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 C5orf67F2Z3F1 127 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 SCAMP1O15126 338 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 MID1O15344 667 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 SNRNP200O75643 2136 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 SIX6O95475 246 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 ECDO95905 644 aaPredicted RBP14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 SEC61A1P61619 476 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 UBXN2BQ14CS0 331 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 MRM1Q6IN84 353 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 RPTNQ6XPR3 784 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 MEPCEQ7L2J0 689 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 RAB42Q8N4Z0 105 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 DOK4Q8TEW6 326 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 ARSGQ96EG1 525 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 IFT27Q9BW83 186 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 NKIRAS2Q9NYR9 191 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 CALML5Q9NZT1 146 aa14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 MRPS23Q9Y3D9 190 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-201ENST00000397901 SCN3AQ9NY46 2000 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 A0A1B0GUH1 482 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 SLC9B1P1A6NJY1 282 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 OR52A4PA6NMU1 304 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 ITGA10O75578 1167 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 ANKRD34CP0C6C1 535 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 ACVR1BP36896 505 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 CD96P40200 585 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 RAB28P51157 221 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 DGCR2P98153 550 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 KRT33BQ14525 404 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 MICBQ29980 383 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 PSRC1Q6PGN9 363 aaPredicted RBP14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 GSG1LQ6UXU4 331 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 ZNF836Q6ZNA1 936 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 FRRS1Q6ZNA5 592 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 TMEM17Q86X19 198 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 GID4Q8IVV7 300 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 OR6S1Q8NH40 331 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 PFN4Q8NHR9 129 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 PHOSPHO2Q8TCD6 241 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 ACTRT3Q9BYD9 372 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 OR51V1Q9H2C8 321 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 TRABD2BA6NFA1 517 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 UNC119BA6NIH7 251 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 HMSDA8MTL9 139 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 GATCO43716 136 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 UBL3O95164 117 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 WNT1P04628 370 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 POU2F2P09086 479 aa14.75□□□□□ -0.05
CHMP1A-201ENST00000397901 VIPR2P41587 438 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms