RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 RPL17P18621 184 aaKnown RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 HIST1H1TP22492 207 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 AHCYP23526 432 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 CTGFP29279 349 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 CLCNKAP51800 687 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TAS2R38P59533 333 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TNFRSF17Q02223 184 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 BAMBIQ13145 260 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 SGCGQ13326 291 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 EOGTQ5NDL2 527 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 GPR135Q8IZ08 494 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF680Q8NEM1 530 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 THEM6Q8WUY1 208 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ADAP2Q9NPF8 381 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 MED9Q9NWA0 146 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 PLAGL1Q9UM63 463 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TRBV2A0A0J9YWF9 115 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TRAPPC13A5PLN9 417 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 HSPB2A8KAH6 182 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ADH1CP00326 375 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 POU3F3P20264 500 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 PREPP48147 710 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 VEGFCP49767 419 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 HSPB2Q16082 182 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 METRNLQ641Q3 311 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TMPRSS11FQ6ZWK6 438 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 NUP54Q7Z3B4 507 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF565Q8N9K5 539 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 OR5M3Q8NGP4 307 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 NECAB3Q96P71 396 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 DDOQ99489 341 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 VRK1Q99986 396 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 PHPT1Q9NRX4 125 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 A4GNTQ9UNA3 340 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 PRELID3BQ9Y3B1 194 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TRAV18A0A075B6X5 111 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 BORCS7-ASMTA0A0B4J1R7 106 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 GLOD5A6NK44 160 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 M0R3H8 397 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 MAN2B1O00754 1011 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 DCNP07585 359 aaKnown RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 NDUFV2P19404 249 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 BMP8BP34820 402 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 RBMXP38159 391 aaKnown RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 PIN1Q13526 163 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 C21orf62-AS1Q17RA5 79 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 PGGHGQ32M88 737 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TCEAL5Q5H9L2 206 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 IER5LQ5T953 404 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 LYPD8Q6UX82 237 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 APOOLQ6UXV4 268 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 BMP8AQ7Z5Y6 402 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 CHST14Q8NCH0 376 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TM4SF18Q96CE8 201 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 LCORQ96JN0 433 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ALG8Q9BVK2 526 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TAAR2Q9P1P5 351 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TAC3Q9UHF0 121 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 WDR45Q9Y484 360 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 CIB4A0PJX0 185 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ANTXRLA6NF34 631 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF705FA8MVS1 300 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TPOP07202 933 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF705DP0CH99 300 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF705BP0CI00 300 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 SNRPBP14678 240 aaKnown RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF20P17024 532 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 LY6G5CQ5SRR4 150 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ZBTB37Q5TC79 503 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 TMEM205Q6UW68 189 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF101Q8IZC7 436 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 ARIH2OSQ8N7S6 290 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 SYNPRQ8TBG9 265 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 C10orf90Q96M02 699 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 POTEKPQ9BYX7 375 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 MTHFD2LQ9H903 347 aaPredicted RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 PLEKHA1Q9HB21 404 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 C14orf166Q9Y224 244 aaKnown RBP5.07□□□□□ -1.6
PTPRD-205ENST00000397611 SNX11Q9Y5W9 270 aa5.07□□□□□ -1.6
PTPRD-205ENST00000397611 EP400Q96L91 3159 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 PRR19A6NJB7 356 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 HMGN4O00479 90 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 PET100P0DJ07 73 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ADH6P28332 368 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 SLC6A6P31641 620 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 GRK6P43250 576 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 LUMP51884 338 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 PDGFRLQ15198 375 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ZIC1Q15915 447 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 ABHD17CQ6PCB6 329 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 TEX261Q6UWH6 196 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 TMCO2Q7Z6W1 182 aaPredicted RBP5.06□□□□□ -1.6
PTPRD-205ENST00000397611 PARGQ86W56 976 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 NRMQ8IXM6 262 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 HORMAD2Q8N7B1 307 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 OR56B4Q8NH76 319 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 OR5K2Q8NHB8 316 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 DUSP19Q8WTR2 217 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 HERVK_113Q902F9 699 aa5.06□□□□□ -1.6
PTPRD-205ENST00000397611 FBXW5Q969U6 566 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms