RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 SLC25A12O75746 678 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 CD53P19397 219 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 SDC2P34741 201 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 ETV6P41212 452 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 DAB2P98082 770 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 HNRNPA0Q13151 305 aaKnown RBP14.78□□□□□ -0.04
SNX6-202ENST00000396526 SKP2Q13309 424 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 ISXQ2M1V0 245 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 HLA-BQ31612 363 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 B3GLCTQ6Y288 498 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 SNRNP27Q8WVK2 155 aaKnown RBP14.78□□□□□ -0.04
SNX6-202ENST00000396526 SMPDL3BQ92485 455 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 PHOX2BQ99453 314 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 TGIF2Q9GZN2 237 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 MUTYHQ9UIF7 546 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 CMAHPQ9Y471 501 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 PCDH15Q96QU1 1955 aa14.78□□□□□ -0.04
SNX6-202ENST00000396526 C19orf67A6NJJ6 358 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 PRKNO60260 465 aaPredicted RBP14.77□□□□□ -0.04
SNX6-202ENST00000396526 TNFSF8P32971 234 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 NKAIN1Q4KMZ8 207 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 GUSBP11Q6P575 273 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 OR6C1Q96RD1 312 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 PILRBQ9UKJ0 227 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 CACNA1EQ15878 2313 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 A0A1W2PQD3 144 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 BLOC1S5-TXNDC5H3BN57 136 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 SIGLEC6O43699 453 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 GP1BBP13224 206 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 CD226Q15762 336 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 FAAH2Q6GMR7 532 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 MZT2AQ6P582 158 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 JAZF1Q86VZ6 243 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 C17orf47Q8NEP4 570 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 NEIL3Q8TAT5 605 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 SAP25Q8TEE9 199 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 OMA1Q96E52 524 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 GUCD1Q96NT3 240 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 LRRN3Q9H3W5 708 aa14.77□□□□□ -0.04
SNX6-202ENST00000396526 SF3B6Q9Y3B4 125 aaKnown RBP14.77□□□□□ -0.04
SNX6-202ENST00000396526 SCRG1O75711 98 aa14.77□□□□□ -0.05
SNX6-202ENST00000396526 DUSP3P51452 185 aaPredicted RBP14.77□□□□□ -0.05
SNX6-202ENST00000396526 TBC1D25Q3MII6 688 aa14.77□□□□□ -0.05
SNX6-202ENST00000396526 FNDC7Q5VTL7 733 aa14.77□□□□□ -0.05
SNX6-202ENST00000396526 CD200R1LQ6Q8B3 271 aa14.77□□□□□ -0.05
SNX6-202ENST00000396526 ATG4DQ86TL0 474 aaPredicted RBP14.77□□□□□ -0.05
SNX6-202ENST00000396526 CCDC190Q86UF4 302 aa14.77□□□□□ -0.05
SNX6-202ENST00000396526 FAM181AQ8N9Y4 354 aa14.77□□□□□ -0.05
SNX6-202ENST00000396526 ZNF485Q8NCK3 441 aa14.77□□□□□ -0.05
SNX6-202ENST00000396526 SDR9C7Q8NEX9 313 aa14.77□□□□□ -0.05
SNX6-202ENST00000396526 HDHD5Q9BXW7 423 aa14.77□□□□□ -0.05
SNX6-202ENST00000396526 CHRNA9Q9UGM1 479 aa14.77□□□□□ -0.05
SNX6-202ENST00000396526 CDC14CA4D256 554 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 ICOSLGO75144 302 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 MRPL3P09001 348 aaKnown RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 CFL1P23528 166 aaKnown RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 RANBP1P43487 201 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 PSMD7P51665 324 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 ACTA2P62736 377 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 ACTG2P63267 376 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 DCDP81605 110 aaKnown RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 DOC2BQ14184 412 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 SLC35D3Q5M8T2 416 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 CNN2Q99439 309 aaKnown RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 NRSN2Q9GZP1 204 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 GAREM1Q9H706 876 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 CTSFQ9UBX1 484 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 ADAM30Q9UKF2 790 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 NOX1Q9Y5S8 564 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 ALG1L2C9J202 215 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 J3QLW9 94 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 OR2T7P0C7T2 308 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 HIST1H1CP16403 213 aaKnown RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 ZNF19P17023 458 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 BCAP31P51572 246 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 CCL7P80098 99 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 FABP5Q01469 135 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 EFR3AQ14156 821 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 NANOGNBQ7Z5D8 188 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 SLC22A16Q86VW1 577 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 OR8H2Q8N162 312 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 TMEM99Q8N816 258 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 OR2T27Q8NH04 317 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 OR5W2Q8NH69 310 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 TRMT61AQ96FX7 289 aaKnown RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 DEPDC7Q96QD5 511 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 HCAR1Q9BXC0 346 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 SP140LQ9H930 580 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 YARS2Q9Y2Z4 477 aaKnown RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 RP1P56715 2156 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 ARID1BQ8NFD5 2236 aaPredicted RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 J3QRE1 110 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 RGS9O75916 674 aaPredicted RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 GAAP10253 952 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 APEHP13798 732 aaKnown RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 TACR3P29371 465 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 CBLN3Q6UW01 205 aa14.76□□□□□ -0.05
SNX6-202ENST00000396526 BPHLQ86WA6 291 aaPredicted RBP14.76□□□□□ -0.05
SNX6-202ENST00000396526 C9orf40Q8IXQ3 194 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms