RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CLEC2DQ9UHP7 191 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 ZNF223Q9UK11 482 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 RPH3AQ9Y2J0 694 aaPredicted RBP4.95□□□□□ -1.62
VPS41-203ENST00000395969 ATG4BQ9Y4P1 393 aa4.95□□□□□ -1.62
VPS41-203ENST00000395969 DOCK9Q9BZ29 2069 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 XIRP2A4UGR9 3374 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 IGLV3-32A0A0A0MS00 114 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 LY6G6EA0A0G2JKS1 128 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 LINC00587B1AMM8 73 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 G3V3Q6 166 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 NARSO43776 548 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 BNIP3LO60238 219 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 BRINP1O60477 761 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 PIAS2O75928 621 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 TOXO94900 526 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 B3GALT4O96024 378 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 LALBAP00709 142 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 H2AFB1P0C5Y9 115 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 H2AFB2P0C5Z0 115 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 GAS1P54826 345 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 DCAF7P61962 342 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 FOXK2Q01167 660 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SCRN3Q0VDG4 424 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 RUNX2Q13950 521 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 MAJINQ3KP22 176 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 HSD17B12Q53GQ0 312 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZNF613Q6PF04 617 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SEZ6L2Q6UXD5 910 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZNF440Q8IYI8 595 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 CLRN3Q8NCR9 226 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 PLPP5Q8NEB5 264 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 TSTD1Q8NFU3 115 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 OR4K14Q8NGD5 310 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 OR8D4Q8NGM9 314 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 PPP1R35Q8TAP8 253 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 RPS4Y2Q8TD47 263 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 BRIX1Q8TDN6 353 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 GPX7Q96SL4 187 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 TREX2Q9BQ50 279 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 DUSP23Q9BVJ7 150 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 FN3KQ9H479 309 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZCCHC4Q9H5U6 513 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 CERS4Q9HA82 394 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 MIEF1Q9NQG6 463 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 TESQ9UGI8 421 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 ADAM30Q9UKF2 790 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SF3B6Q9Y3B4 125 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 NPTNQ9Y639 398 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 CACNG2Q9Y698 323 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 U3KQA8 63 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 BRCA2P51587 3418 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 KIAA1549Q9HCM3 1950 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 MEIKINA0A087WXM9 373 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 A0A1B0GVI7 797 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 GNG14A0A1W2PPG7 69 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 TTLL8A6PVC2 850 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 STMND1H3BQB6 276 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 DNASE2O00115 360 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 P2RX6O15547 441 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SSX5O60225 188 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SELENOFO60613 162 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 SNRNP200O75643 2136 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 THEGLP0DJG4 465 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 GLB1P16278 677 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 FPR3P25089 353 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 PSMB5P28074 263 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 PBLDP30039 288 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 BDH1Q02338 343 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 GPR176Q14439 515 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ETFDHQ16134 617 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 C22orf42Q6IC83 251 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 FRRS1Q6ZNA5 592 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZNF621Q6ZSS3 439 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 RASSF6Q6ZTQ3 369 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 RNF175Q8N4F7 328 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 OR5T2Q8NGG2 359 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ZDHHC1Q8WTX9 485 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 YIPF5Q969M3 257 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 MTFMTQ96DP5 389 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 SLC35G5Q96KT7 338 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 KCTD7Q96MP8 289 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 ATF6BQ99941 703 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 POLDIP3Q9BY77 421 aaKnown RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 LMAN1LQ9HAT1 526 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 FGF20Q9NP95 211 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 COA4Q9NYJ1 87 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 PILRBQ9UKJ0 227 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 EDARQ9UNE0 448 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 BAIAP2Q9UQB8 552 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 KCNK6Q9Y257 313 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 PLEKHM1Q9Y4G2 1056 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 CEP350Q5VT06 3117 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 CHD7Q9P2D1 2997 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 PRAMEF33A0A0G2JMD5 474 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 NPIPB13A6NJU9 1138 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 KDM4EB2RXH2 506 aaPredicted RBP4.94□□□□□ -1.62
VPS41-203ENST00000395969 NPIPB4C9JG80 1138 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 PRSS44E7EML9 344 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 H0YGG7 62 aa4.94□□□□□ -1.62
VPS41-203ENST00000395969 GMDSO60547 372 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms