RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 CCL23P55773 120 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 EWSR1Q01844 656 aaKnown RBP eCLIP4.41□□□□□ -1.7
CDKN3-203ENST00000395577 IL24Q13007 206 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 SLC10A1Q14973 349 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 LTB4RQ15722 352 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 TMEM52BQ4KMG9 183 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 SPATA46Q5T0L3 261 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 TTC23Q5W5X9 447 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 STAC2Q6ZMT1 411 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 IFNEQ86WN2 208 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 HIPK1Q86Z02 1210 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 RPL3LQ92901 407 aaKnown RBP4.41□□□□□ -1.7
CDKN3-203ENST00000395577 GLT1D1Q96MS3 346 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 MCCC1Q96RQ3 725 aaPredicted RBP4.41□□□□□ -1.7
CDKN3-203ENST00000395577 MYCBPQ99417 103 aaPredicted RBP4.41□□□□□ -1.7
CDKN3-203ENST00000395577 OMDQ99983 421 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 TRIM6Q9C030 488 aaPredicted RBP4.41□□□□□ -1.7
CDKN3-203ENST00000395577 DHRS4-AS1Q9P1J3 65 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 NYAP2Q9P242 653 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 GNG12Q9UBI6 72 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 Q9Y3F1 56 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 WDR45Q9Y484 360 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 MAB21L2Q9Y586 359 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 ZNF532Q9HCE3 1301 aa4.41□□□□□ -1.7
CDKN3-203ENST00000395577 BAZ2AQ9UIF9 1905 aaKnown RBP4.4□□□□□ -1.7
CDKN3-203ENST00000395577 ZFYVE26Q68DK2 2539 aa4.4□□□□□ -1.7
CDKN3-203ENST00000395577 CCT8L1PA6NM43 557 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 E9PAM4 449 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 TRIM3O75382 744 aaPredicted RBP4.4□□□□□ -1.71
CDKN3-203ENST00000395577 CABYRO75952 493 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 IL9P15248 144 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 ATP5A1P25705 553 aaKnown RBP4.4□□□□□ -1.71
CDKN3-203ENST00000395577 OR1D4P47884 311 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 PPT1P50897 306 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 PUDPQ08623 228 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 PEX6Q13608 980 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 CYP51A1Q16850 503 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 MAJINQ3KP22 176 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 SBK1Q52WX2 424 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 CEP55Q53EZ4 464 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 ATF7IP2Q5U623 682 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 OR8G2PQ6IF36 304 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 CENPPQ6IPU0 288 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 LRRC43Q8N309 656 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 TRMT10AQ8TBZ6 339 aaKnown RBP4.4□□□□□ -1.71
CDKN3-203ENST00000395577 PHOSPHO2Q8TCD6 241 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 TOMM40LQ969M1 308 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 ZBED6CLQ96FA7 236 aaPredicted RBP4.4□□□□□ -1.71
CDKN3-203ENST00000395577 HCAR1Q9BXC0 346 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 UBE2ZQ9H832 354 aaPredicted RBP4.4□□□□□ -1.71
CDKN3-203ENST00000395577 IMPAD1Q9NX62 359 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 ZZEF1O43149 2961 aa4.4□□□□□ -1.71
CDKN3-203ENST00000395577 PLXNA3P51805 1871 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 TRAV9-2A0A087WT02 112 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 ZNF840PA6NDX5 716 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 EFCAB7A8K855 629 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 F5H6K3 240 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 G3V3Y1 287 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 SAP18O00422 153 aaKnown RBP4.39□□□□□ -1.71
CDKN3-203ENST00000395577 KBTBD11O94819 623 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 PIGRP01833 764 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 TPSB2P20231 275 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 HNF1AP20823 631 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 TBXA2RP21731 343 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 UBE2HP62256 183 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 DEFB103AP81534 67 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 HMGN5P82970 282 aaKnown RBP4.39□□□□□ -1.71
CDKN3-203ENST00000395577 KLRC3Q07444 240 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 TPSAB1Q15661 275 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 SYPL1Q16563 259 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 ZNF57Q68EA5 555 aaPredicted RBP4.39□□□□□ -1.71
CDKN3-203ENST00000395577 ACSM5Q6NUN0 579 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 CCBE1Q6UXH8 406 aaPredicted RBP4.39□□□□□ -1.71
CDKN3-203ENST00000395577 TMCO2Q7Z6W1 182 aaPredicted RBP4.39□□□□□ -1.71
CDKN3-203ENST00000395577 ACOT1Q86TX2 421 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 FGFRL1Q8N441 504 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 ANKFN1Q8N957 763 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 RIT2Q99578 217 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 SENP1Q9P0U3 644 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 PAK5Q9P286 719 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 XPO7Q9UIA9 1087 aaKnown RBP4.39□□□□□ -1.71
CDKN3-203ENST00000395577 CACNA1GO43497 2377 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 CEP295Q9C0D2 2601 aa4.39□□□□□ -1.71
CDKN3-203ENST00000395577 PCNX3Q9H6A9 2034 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 SIP14410 1827 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 OR6C65A6NJZ3 312 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 PHF1O43189 567 aaPredicted RBP4.38□□□□□ -1.71
CDKN3-203ENST00000395577 SRPX2O60687 465 aaPredicted RBP4.38□□□□□ -1.71
CDKN3-203ENST00000395577 ZNF253O75346 499 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 SURF6O75683 361 aaKnown RBP4.38□□□□□ -1.71
CDKN3-203ENST00000395577 GJB5O95377 273 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 F10P00742 488 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 H2AFZP0C0S5 128 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 CT45A10P0DMU9 189 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 UMPSP11172 480 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 ALDH3B2P48448 385 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 RPL8P62917 257 aaKnown RBP4.38□□□□□ -1.71
CDKN3-203ENST00000395577 CSTF1Q05048 431 aaKnown RBP4.38□□□□□ -1.71
CDKN3-203ENST00000395577 ZFP36L1Q07352 338 aaKnown RBP4.38□□□□□ -1.71
CDKN3-203ENST00000395577 GGTA1PQ4G0N0 100 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms