RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TSC22D2O75157 780 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 ATP1B1P05026 303 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 ANKRD34CP0C6C1 535 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 GLULP15104 373 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 CCR5P51681 352 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 HHEXQ03014 270 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 PLA1AQ53H76 456 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 TCTE3Q8IZS6 198 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 CDRT4Q8N9R6 151 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 TSTD1Q8NFU3 115 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 OR4C6Q8NH72 309 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 DEDD2Q8WXF8 326 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 SNAPC3Q92966 411 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 COQ7Q99807 217 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 LMAN1LQ9HAT1 526 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 NUDT15Q9NV35 164 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 ST6GALNAC2Q9UJ37 374 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 COPS3Q9UNS2 423 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 AK6Q9Y3D8 172 aaKnown RBP12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 HSPB11Q9Y547 144 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 ANKRD61A6NGH8 418 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 RIIAD1A6NNX1 92 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 PRR32B1ATL7 298 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 PLPP2O43688 288 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 SELENOFO60613 162 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 SLC19A2O60779 497 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF780AO75290 641 aaPredicted RBP12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 MAOBP27338 520 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 SLC6A1P30531 599 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 MAP3K8P41279 467 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 PGDP52209 483 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 TMEM44Q2T9K0 475 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 SLC36A2Q495M3 483 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 CCDC58Q4VC31 144 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 THOC7Q6I9Y2 204 aaKnown RBP12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 METAP1DQ6UB28 335 aaPredicted RBP12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 ABHD13Q7L211 337 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 CSNK1A1LQ8N752 337 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 CAMKVQ8NCB2 501 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 BAHD1Q8TBE0 780 aaPredicted RBP12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 ZFAND1Q8TCF1 268 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 RFT1Q96AA3 541 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 FKRPQ9H9S5 495 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 DUSP22Q9NRW4 184 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 SLC35A3Q9Y2D2 325 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 IER3IP1Q9Y5U9 82 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 THADAQ6YHU6 1953 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 PCDH15Q96QU1 1955 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 A0A1W2PPC4 97 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 GALR3O60755 368 aaPredicted RBP12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 FZD7O75084 574 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 SOX30O94993 753 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 RCBTB2O95199 551 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 AGR2O95994 175 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 SRFP11831 508 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 PTHLHP12272 177 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 CXCL3P19876 107 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 BTG2P78543 158 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 RIN1Q13671 783 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 ALG10BQ5I7T1 473 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 FAM98AQ8NCA5 519 aaKnown RBP12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 OR11H7Q8NGC8 314 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 PELI1Q96FA3 418 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 KLHDC7BQ96G42 594 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 DERL3Q96Q80 235 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 OR14A2Q96R54 314 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 LRRC61Q9BV99 259 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 PHF7Q9BWX1 381 aaPredicted RBP12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 TWSG1Q9GZX9 223 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 KCNN2Q9H2S1 579 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 AUNIPQ9H7T9 357 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 LRIT1Q9P2V4 623 aa12.39□□□□□ -0.43
GTF2F1-201ENST00000394456 A0A0A6YYC8 382 aaPredicted RBP12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 A0A0J9YY10 115 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 SLC22A31A6NKX4 558 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 I3L1I5 382 aaPredicted RBP12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 FABP7O15540 132 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 NDUFB5O43674 189 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 SLC43A1O75387 559 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 IGLV3-19P01714 112 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 ST6GAL1P15907 406 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 S1PR1P21453 382 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 PITPNBP48739 271 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 MAZP56270 477 aaKnown RBP12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 SMAD4Q13485 552 aaKnown RBP12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 DMKNQ6E0U4 476 aaPredicted RBP12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 NPSR1Q6W5P4 371 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 SYT13Q7L8C5 426 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 ZDHHC1Q8WTX9 485 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF524Q96C55 264 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 RASD2Q96D21 266 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 CITED4Q96RK1 184 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 NMNAT3Q96T66 252 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 SLC25A18Q9H1K4 315 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 CDCP1Q9H5V8 836 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 UBE2ZQ9H832 354 aaPredicted RBP12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 SLC23A1Q9UHI7 598 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 KIR2DS5A0A0G2JLQ3 304 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 A0A0G2JNG1 304 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms