RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 HABP2Q14520 560 aaPredicted RBP17.44■□□□□ 0.38
HOXC6-202ENST00000394331 DHCR24Q15392 516 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 ZNF124Q15973 351 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 LINC00303Q3SY05 128 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 SLC36A1Q7Z2H8 476 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 TBC1D19Q8N5T2 526 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 SIRT6Q8N6T7 355 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 NUS1Q96E22 293 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 OR1F2PQ96R84 312 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 EGLN1Q9GZT9 426 aa17.44■□□□□ 0.38
HOXC6-202ENST00000394331 ZNF629Q9UEG4 869 aaPredicted RBP17.44■□□□□ 0.38
HOXC6-202ENST00000394331 PAK4O96013 591 aaPredicted RBP17.43■□□□□ 0.38
HOXC6-202ENST00000394331 MAT2AP31153 395 aaKnown RBP17.43■□□□□ 0.38
HOXC6-202ENST00000394331 SNRPEP62304 92 aaKnown RBP17.43■□□□□ 0.38
HOXC6-202ENST00000394331 PPIAP62937 165 aaKnown RBP17.43■□□□□ 0.38
HOXC6-202ENST00000394331 UBE2IP63279 158 aaKnown RBP17.43■□□□□ 0.38
HOXC6-202ENST00000394331 TRAM2Q15035 370 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 PLPP4Q5VZY2 271 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 NUDT18Q6ZVK8 323 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 OR2AK2Q8NG84 335 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 OR5M1Q8NGP8 315 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 NR4A3Q92570 626 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 OSTF1Q92882 214 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 GINS4Q9BRT9 223 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 POP7O75817 140 aaKnown RBP17.43■□□□□ 0.38
HOXC6-202ENST00000394331 ATP6V1E1P36543 226 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 CDNFQ49AH0 187 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 ZNF613Q6PF04 617 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 GID4Q8IVV7 300 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 OR4D9Q8NGE8 314 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 SLC39A7Q92504 469 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 RAD51AP1Q96B01 352 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 MNTQ99583 582 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 WFDC6Q9BQY6 131 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 TCF7L1Q9HCS4 588 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 MIEF1Q9NQG6 463 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 C14orf105Q9NVL8 296 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 AHSPQ9NZD4 102 aa17.43■□□□□ 0.38
HOXC6-202ENST00000394331 KIF26AQ9ULI4 1882 aaPredicted RBP17.42■□□□□ 0.38
HOXC6-202ENST00000394331 HTR2AP28223 471 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 RBMS3Q6XE24 437 aaKnown RBP17.42■□□□□ 0.38
HOXC6-202ENST00000394331 LINGO2Q7L985 606 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 SAGE1Q9NXZ1 904 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 METTL1Q9UBP6 276 aaKnown RBP17.42■□□□□ 0.38
HOXC6-202ENST00000394331 GPR34Q9UPC5 381 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 HCFC2Q9Y5Z7 792 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 KLHL18O94889 574 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 MEF2AQ02078 507 aaPredicted RBP17.42■□□□□ 0.38
HOXC6-202ENST00000394331 IER5LQ5T953 404 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 PPP1R16AQ96I34 528 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 CRISPLD2Q9H0B8 497 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 KLHL1Q9NR64 748 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 DMRT1Q9Y5R6 373 aa17.42■□□□□ 0.38
HOXC6-202ENST00000394331 SPINT1O43278 529 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 RDH16O75452 317 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 PCDH8O95206 1070 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 MT-ND5P03915 603 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 RB1P06400 928 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 IL3P08700 152 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 ADH5P11766 374 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 PDZK1IP1Q13113 114 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 PRAMEF14Q5SWL7 426 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 KCNRGQ8N5I3 272 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 OR2L2Q8NH16 312 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 OR52I2Q8NH67 350 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 FCAMRQ8WWV6 532 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 FCRL4Q96PJ5 515 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 CXorf36Q9H7Y0 433 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 NINQ8N4C6 2090 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 K7ESM1 405 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 PAPLNO95428 1278 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 NTHL1P78549 312 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 HTRA4P83105 476 aaPredicted RBP17.41■□□□□ 0.38
HOXC6-202ENST00000394331 DPTQ07507 201 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 HEPHL1Q6MZM0 1159 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 ARL9Q6T311 187 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 LCTLQ6UWM7 567 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 MISPQ8IVT2 679 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 SEC11CQ9BY50 192 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 SLC6A16Q9GZN6 736 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 OR51I1Q9H343 314 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 CLEC4AQ9UMR7 237 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 DOCK6Q96HP0 2047 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 RFXAPO00287 272 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 PHYHO14832 338 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 NRG3P56975 720 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 CXADRP78310 365 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 TSSK4Q6SA08 328 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 ESPNLQ6ZVH7 1005 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 OR2W3Q7Z3T1 314 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 ADCK2Q7Z695 626 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 STX12Q86Y82 276 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 LMNTD1Q8N9Z9 388 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 OR4Q3Q8NH05 313 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 PGLYRP3Q96LB9 341 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 MRPL15Q9P015 296 aaKnown RBP17.41■□□□□ 0.38
HOXC6-202ENST00000394331 H2AFY2Q9P0M6 372 aaPredicted RBP17.41■□□□□ 0.38
HOXC6-202ENST00000394331 PCDHB10Q9UN67 800 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 SLC27A6Q9Y2P4 619 aa17.41■□□□□ 0.38
HOXC6-202ENST00000394331 C2orf74A8MZ97 194 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms