RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 DYRK3O43781 588 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 NCR1O76036 304 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 CFIP05156 583 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 SLC6A6P31641 620 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 RORCP51449 518 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 GPR143P51810 404 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 ERVK-25P63136 954 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 EGR4Q05215 589 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 FAM69BQ5VUD6 431 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 STEAP3Q658P3 488 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 RPL13AP3Q6NVV1 102 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 LYPD4Q6UWN0 246 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 LYSMD2Q8IV50 215 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 LAX1Q8IWV1 398 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 EID2Q8N6I1 236 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 FAM98AQ8NCA5 519 aaKnown RBP13.78□□□□□ -0.2
GPC3-202ENST00000394299 FAM71CQ8NEG0 241 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 STT3BQ8TCJ2 826 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 DNAJA4Q8WW22 397 aaPredicted RBP13.78□□□□□ -0.2
GPC3-202ENST00000394299 NMNAT3Q96T66 252 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 SMURF1Q9HCE7 757 aa13.78□□□□□ -0.2
GPC3-202ENST00000394299 A0A1B0GTQ1 180 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 ELOA3DA6NLF2 546 aaPredicted RBP13.77□□□□□ -0.21
GPC3-202ENST00000394299 SLC30A4O14863 429 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 UPK1BO75841 260 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 NDUFB2O95178 105 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 TGM1P22735 817 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 LTBQ06643 244 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 BIKQ13323 160 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 TMEM44Q2T9K0 475 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 ELOA3BQ3SY89 546 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 ZMAT1Q5H9K5 638 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 PWWP2BQ6NUJ5 590 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 RPTNQ6XPR3 784 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 CARFQ8N187 725 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 C10orf53Q8N6V4 93 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 ELOA3Q8NG57 546 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 RASD2Q96D21 266 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 SDHCQ99643 169 aaPredicted RBP13.77□□□□□ -0.21
GPC3-202ENST00000394299 GAREM1Q9H706 876 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 AKIRIN1Q9H9L7 192 aaPredicted RBP13.77□□□□□ -0.21
GPC3-202ENST00000394299 ADGRL4Q9HBW9 690 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 APMAPQ9HDC9 416 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 C14orf119Q9NWQ9 140 aa13.77□□□□□ -0.21
GPC3-202ENST00000394299 PLEKHB1Q9UF11 243 aaPredicted RBP13.77□□□□□ -0.21
GPC3-202ENST00000394299 ZNF346Q9UL40 294 aaKnown RBP13.77□□□□□ -0.21
GPC3-202ENST00000394299 FUOMA2VDF0 154 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 SLC35F4A4IF30 521 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 FAM171A2A8MVW0 826 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 SBK2P0C263 348 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ZNF3P17036 446 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 AQP2P41181 271 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ZNF117Q03924 483 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 HLA-DQA1Q5Y7H0 255 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ATG4DQ86TL0 474 aaPredicted RBP13.76□□□□□ -0.21
GPC3-202ENST00000394299 CCDC190Q86UF4 302 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ZNF527Q8NB42 609 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ATP6V1C2Q8NEY4 427 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 OR1N1Q8NGS0 311 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 DAZLQ92904 295 aaKnown RBP13.76□□□□□ -0.21
GPC3-202ENST00000394299 WWTR1Q9GZV5 400 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ENAMQ9NRM1 1142 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 C2orf72A6NCS6 295 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 TAF4O00268 1085 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 HCRTR2O43614 444 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ZNF354AO60765 605 aaPredicted RBP13.76□□□□□ -0.21
GPC3-202ENST00000394299 ITPKBP27987 946 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 GABRA5P31644 462 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 OR12D2P58182 307 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ZNF85Q03923 595 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 C1QL3Q5VWW1 255 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 WBP2NLQ6ICG8 309 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 LCN10Q6JVE6 187 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ARIH2OSQ8N7S6 290 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 OR52N1Q8NH53 320 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ZNF563Q8TA94 476 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ASB15Q8WXK1 588 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 SMPDL3BQ92485 455 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 SLC35B4Q969S0 331 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 SLC25A46Q96AG3 418 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 KTI12Q96EK9 354 aaPredicted RBP13.76□□□□□ -0.21
GPC3-202ENST00000394299 KCTD7Q96MP8 289 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 KATNB1Q9BVA0 655 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 EVA1AQ9H8M9 152 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ISYNA1Q9NPH2 558 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 ADAMTS9Q9P2N4 1935 aa13.76□□□□□ -0.21
GPC3-202ENST00000394299 IGHV5-10-1A0A0J9YXX1 117 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 A0A1W2PQL4 384 aaPredicted RBP13.75□□□□□ -0.21
GPC3-202ENST00000394299 TTC36A6NLP5 189 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 J3QLW9 94 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 OR7A10O76100 309 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 ZNF19P17023 458 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 ABCD3P28288 659 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 TACR3P29371 465 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 IL12BP29460 328 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 NAA10P41227 235 aaPredicted RBP13.75□□□□□ -0.21
GPC3-202ENST00000394299 E2F1Q01094 437 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 PLCXD2Q0VAA5 305 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 NR0B2Q15466 257 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 OR5M10Q6IEU7 315 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms