RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 DAB2P98082 770 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 RPL6Q02878 288 aaKnown RBP6.6□□□□□ -1.35
SMAD1-202ENST00000394092 SELENBP1Q13228 472 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 UBXN2BQ14CS0 331 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 PON3Q15166 354 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 NNATQ16517 81 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 KLHL26Q53HC5 615 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 YOD1Q5VVQ6 348 aaPredicted RBP6.6□□□□□ -1.35
SMAD1-202ENST00000394092 FAAH2Q6GMR7 532 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 NUP54Q7Z3B4 507 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 LRRC28Q86X40 367 aaPredicted RBP6.6□□□□□ -1.35
SMAD1-202ENST00000394092 PLXDC1Q8IUK5 500 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 EGFL6Q8IUX8 553 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 UBQLNLQ8IYU4 475 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 GPR135Q8IZ08 494 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 Q8N402 240 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 CELF2-AS1Q8N7Q2 184 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 TEX19Q8NA77 164 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 SDR9C7Q8NEX9 313 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 IL17RDQ8NFM7 739 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 C3orf49Q96BT1 292 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 SHDQ96IW2 340 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 TTYH2Q9BSA4 534 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 HCAR1Q9BXC0 346 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 ENKD1Q9H0I2 346 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 MIR1-1HGQ9H1L0 117 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 UBE2ZQ9H832 354 aaPredicted RBP6.6□□□□□ -1.35
SMAD1-202ENST00000394092 ERVMER34-1Q9H9K5 563 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 ISG20L2Q9H9L3 353 aaKnown RBP6.6□□□□□ -1.35
SMAD1-202ENST00000394092 WDR70Q9NW82 654 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 ZNF221Q9UK13 617 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 CA14Q9ULX7 337 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 CLDN16Q9Y5I7 305 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 CLCA3PQ9Y6N3 262 aa6.6□□□□□ -1.35
SMAD1-202ENST00000394092 IGHV5-51A0A0C4DH38 117 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 ZC3H12DA2A288 527 aaKnown RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 SMIM30A4D0T7 59 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 IMPA2O14732 288 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 ZNF264O43296 627 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 NUDT21O43809 227 aaKnown RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 HPGDSO60760 199 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 ADAM11O75078 769 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 TMEM127O75204 238 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 ATP6V1G1O75348 118 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 HIST1H1CP16403 213 aaKnown RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 HTR3AP46098 478 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 MAP2K3P46734 347 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 EVX1P49640 407 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 CCR4P51679 360 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 SLC37A1P57057 533 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 RPS4XP62701 263 aaKnown RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 GPLD1P80108 840 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 FOXK1P85037 733 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 ZNF85Q03923 595 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 MRPL28Q13084 256 aaKnown RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 FZD5Q13467 585 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 ERV3-1Q14264 604 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 QPRTQ15274 297 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 SF3A2Q15428 464 aaKnown RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 ELAVL1Q15717 326 aaKnown RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 TAB1Q15750 504 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 DEFB133Q30KQ1 61 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 CDONQ4KMG0 1287 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 CCDC58Q4VC31 144 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 ZNF362Q5T0B9 420 aaPredicted RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 HACD4Q5VWC8 232 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 RSBN1Q5VWQ0 802 aaPredicted RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 HLA-DQA1Q5Y7H0 255 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 FCRLBQ6BAA4 426 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 TMEM91Q6ZNR0 172 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 JAZF1Q86VZ6 243 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 KMT5CQ86Y97 462 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 TMEM151BQ8IW70 566 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 SLC35F2Q8IXU6 374 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 SHISA5Q8N114 240 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 METTL27Q8N6F8 245 aaPredicted RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 CYB561A3Q8NBI2 242 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 OR5M3Q8NGP4 307 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 OR4K13Q8NH42 304 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 OR14A16Q8NHC5 309 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 PHOSPHO1Q8TCT1 267 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 LIPHQ8WWY8 451 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 PHYHIPQ92561 330 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 DAZLQ92904 295 aaKnown RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 SMIM19Q96E16 107 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 ZC3HAV1LQ96H79 300 aaKnown RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 LCORQ96JN0 433 aaPredicted RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 UBL7Q96S82 380 aaPredicted RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 GAS2L1Q99501 681 aaPredicted RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 SOSTQ9BQB4 213 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 YIPF2Q9BWQ6 316 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 RNF32Q9H0A6 362 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 NRIP3Q9NQ35 241 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 LRIT1Q9P2V4 623 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 RABL2AQ9UBK7 228 aaPredicted RBP6.59□□□□□ -1.35
SMAD1-202ENST00000394092 TEKT2Q9UIF3 430 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 RABL2BQ9UNT1 228 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 MOKQ9UQ07 419 aa6.59□□□□□ -1.35
SMAD1-202ENST00000394092 IER3IP1Q9Y5U9 82 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms