RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ZHX1-C8orf76Q96EF9 292 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 ARL5BQ96KC2 179 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 ARHGDIGQ99819 225 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 POTEKPQ9BYX7 375 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 ALG2Q9H553 416 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 SELENONQ9NZV5 590 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 TMEM181Q9P2C4 612 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 BAG5Q9UL15 447 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 TRAPPC4Q9Y296 219 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 EMC9Q9Y3B6 208 aa16.99■□□□□ 0.31
PDLIM7-204ENST00000393546 HCFC1P51610 2035 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 A8MVM7 634 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 PRKD3O94806 890 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 PMS2P2O95744 297 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 GSK3BP49841 420 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 OR2B6P58173 313 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 FAM214BQ7L5A3 538 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 ATG4DQ86TL0 474 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 RNF128Q8TEB7 428 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 DNAJA4Q8WW22 397 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 PROX1Q92786 737 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 STARD4Q96DR4 205 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 NSL1Q96IY1 281 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 PRR14Q9BWN1 585 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 C12orf10Q9HB07 376 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 SPAG4Q9NPE6 437 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 ADA2Q9NZK5 511 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 JKAMPQ9P055 326 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 ABCD2Q9UBJ2 740 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 FOXD3Q9UJU5 478 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 PACSIN3Q9UKS6 424 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 CLEC4AQ9UMR7 237 aa16.98■□□□□ 0.31
PDLIM7-204ENST00000393546 A0A1B0GWA3 101 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 ELOA3DA6NLF2 546 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 M0R3H8 397 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 DNPH1O43598 174 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 FMO6PO60774 539 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 SS18L1O75177 396 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 PNMTP11086 282 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 COX6B1P14854 86 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 HTR2AP28223 471 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 CRYBA2P53672 197 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 MXRA7P84157 204 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 BNIP2Q12982 314 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 OR1Q1Q15612 314 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 ELOA3BQ3SY89 546 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 FBXL19-AS1Q494R0 122 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 LRRC23Q53EV4 343 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 VWA1Q6PCB0 445 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 ULK3Q6PHR2 472 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 BTLAQ7Z6A9 289 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 ELOA3Q8NG57 546 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 RNF217Q8TC41 542 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 STK35Q8TDR2 534 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 RNASE6Q93091 150 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 DNAJA3Q96EY1 480 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 SLC47A1Q96FL8 570 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 MCHR1Q99705 422 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 KCTD14Q9BQ13 255 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 SPOCK3Q9BQ16 436 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 WFDC6Q9BQY6 131 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 GP6Q9HCN6 339 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 NPDC1Q9NQX5 325 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 NDE1Q9NXR1 346 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 GMPR2Q9P2T1 348 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 SLC9A8Q9Y2E8 581 aa16.97■□□□□ 0.31
PDLIM7-204ENST00000393546 IGHV3-15A0A0B4J1V0 119 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 ZC3H12DA2A288 527 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 CXCR6O00574 342 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 MSTNO14793 375 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 TPST2O60704 377 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 EIF1BO60739 113 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 SMNDC1O75940 238 aaKnown RBP eCLIP16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 UQCRC1P31930 480 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 IDUAP35475 653 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 SLC35A1P78382 337 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 RASGEF1BQ0VAM2 473 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 GUSBP1Q15486 140 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 CYBRD1Q53TN4 286 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 ALG10BQ5I7T1 473 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 TMEM201Q5SNT2 666 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 C16orf89Q6UX73 402 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 MEX3BQ6ZN04 569 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 LUZP2Q86TE4 346 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 OR6T1Q8NGN1 323 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 VANGL1Q8TAA9 524 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 ABHD3Q8WU67 409 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 NAA11Q9BSU3 229 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 ENKD1Q9H0I2 346 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 KLHL9Q9P2J3 617 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 PROCRQ9UNN8 238 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 SH3GLB1Q9Y371 365 aa16.96■□□□□ 0.31
PDLIM7-204ENST00000393546 A8MXE2 369 aa16.95■□□□□ 0.3
PDLIM7-204ENST00000393546 TMEM229AB2RXF0 380 aa16.95■□□□□ 0.3
PDLIM7-204ENST00000393546 SMAD9O15198 467 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-204ENST00000393546 CYTIPO60759 359 aa16.95■□□□□ 0.3
PDLIM7-204ENST00000393546 GPIP06744 558 aa16.95■□□□□ 0.3
PDLIM7-204ENST00000393546 IMPDH2P12268 514 aa16.95■□□□□ 0.3
PDLIM7-204ENST00000393546 SLC25A3Q00325 362 aa16.95■□□□□ 0.3
PDLIM7-204ENST00000393546 C1orf140Q5VVS0 124 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms