RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SIRPAP78324 504 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 CRYZQ08257 329 aaKnown RBP17.33■□□□□ 0.37
CBX1-202ENST00000393408 KLF9Q13886 244 aaPredicted RBP17.33■□□□□ 0.37
CBX1-202ENST00000393408 GSG1Q2KHT4 349 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 ITPRIPL2Q3MIP1 535 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 TMEM196Q5HYL7 178 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 ALG10BQ5I7T1 473 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 ZC3H14Q6PJT7 736 aaKnown RBP17.33■□□□□ 0.37
CBX1-202ENST00000393408 LINC00114Q6XXX2 140 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 OVCH1Q7RTY7 1134 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 CA13Q8N1Q1 262 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 POMGNT2Q8NAT1 580 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 FAM98AQ8NCA5 519 aaKnown RBP17.33■□□□□ 0.37
CBX1-202ENST00000393408 WDR92Q96MX6 357 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 LRFN5Q96NI6 719 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 ORAI3Q9BRQ5 295 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 EVA1BQ9NVM1 165 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 RNF215Q9Y6U7 377 aa17.33■□□□□ 0.37
CBX1-202ENST00000393408 LEUTXA8MZ59 168 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 CTDSPLO15194 276 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 H2AFB2P0C5Z0 115 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 PVRP15151 417 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 LSSP48449 732 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 GPR18Q14330 331 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 DGAT2L6Q6ZPD8 337 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 BTN2A1Q7KYR7 527 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 UBE2Q1Q7Z7E8 422 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 SLC35F2Q8IXU6 374 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 CMIPQ8IY22 773 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 ZNF687Q8N1G0 1237 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 LSMEM1Q8N8F7 131 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 OR52R1Q8NGF1 315 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 OR51L1Q8NGJ5 315 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 HGDQ93099 445 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 ANKRD9Q96BM1 317 aaPredicted RBP17.33■□□□□ 0.36
CBX1-202ENST00000393408 MED30Q96HR3 178 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 OR14A2Q96R54 314 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 CCDC86Q9H6F5 360 aaKnown RBP17.33■□□□□ 0.36
CBX1-202ENST00000393408 CAPN10Q9HC96 672 aa17.33■□□□□ 0.36
CBX1-202ENST00000393408 AK6Q9Y3D8 172 aaKnown RBP17.33■□□□□ 0.36
CBX1-202ENST00000393408 TRABD2BA6NFA1 517 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 GATBO75879 557 aaKnown RBP17.32■□□□□ 0.36
CBX1-202ENST00000393408 MT-ND4P03905 459 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 WNT1P04628 370 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 CD1AP06126 327 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 SYPP08247 313 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 POU3F3P20264 500 aaPredicted RBP17.32■□□□□ 0.36
CBX1-202ENST00000393408 NAA10P41227 235 aaPredicted RBP17.32■□□□□ 0.36
CBX1-202ENST00000393408 ST3GAL2Q16842 350 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 ESCO2Q56NI9 601 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 RPL22L1Q6P5R6 122 aaKnown RBP17.32■□□□□ 0.36
CBX1-202ENST00000393408 TEX261Q6UWH6 196 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 LUZP2Q86TE4 346 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 SMIM4Q8WVI0 70 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 MS4A3Q96HJ5 214 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 PCDHGA9Q9Y5G4 932 aaKnown RBP17.32■□□□□ 0.36
CBX1-202ENST00000393408 ENTPD2Q9Y5L3 495 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 U3KQ87 197 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 A0A1W2PQ72 361 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 GALR3O60755 368 aaPredicted RBP17.32■□□□□ 0.36
CBX1-202ENST00000393408 NDUFB2O95178 105 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 TPOP07202 933 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 UQCRC1P31930 480 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 TNFRSF4P43489 277 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 DYRK1AQ13627 763 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 SLC22A10Q63ZE4 541 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 PRSS45Q7RTY3 260 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 SLITRK4Q8IW52 837 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 LGALS14Q8TCE9 139 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 ASB12Q8WXK4 309 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 HEXA-AS1Q9H8Q6 139 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 NRIP3Q9NQ35 241 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 IER3IP1Q9Y5U9 82 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 CDH23Q9H251 3354 aa17.32■□□□□ 0.36
CBX1-202ENST00000393408 TRBV2A0A0J9YWF9 115 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 ANKRD61A6NGH8 418 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 RASGRP1O95267 797 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 CRYZL1O95825 349 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 IGKV1D-16P01601 117 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 SULT1A3P0DMM9 295 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 SULT1A4P0DMN0 295 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 PSG6Q00889 435 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 UNQ9370/PRO34162Q6UXP9 181 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 BAHD1Q8TBE0 780 aaPredicted RBP17.31■□□□□ 0.36
CBX1-202ENST00000393408 GIMAP1Q8WWP7 306 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 AUNIPQ9H7T9 357 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 UCKL1Q9NWZ5 548 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 GNG8Q9UK08 70 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 ARHGEF17Q96PE2 2063 aaPredicted RBP17.31■□□□□ 0.36
CBX1-202ENST00000393408 MEIKINA0A087WXM9 373 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 MCIDASD6RGH6 385 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 ZNF593O00488 134 aaPredicted RBP17.31■□□□□ 0.36
CBX1-202ENST00000393408 GPR171O14626 319 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 SLC22A5O76082 557 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 RAF1P04049 648 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 COL9A1P20849 921 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 NTSR1P30989 418 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 SNTB2Q13425 540 aaKnown RBP17.31■□□□□ 0.36
CBX1-202ENST00000393408 UBE2NLQ5JXB2 153 aa17.31■□□□□ 0.36
CBX1-202ENST00000393408 MTFR2Q6P444 385 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms