RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MEIOBQ8N635 442 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 CLDN22Q8N7P3 220 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 OR2V1Q8NHB1 315 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 MBD3L2Q8NHZ7 208 aaPredicted RBP11.92□□□□□ -0.5
USP44-202ENST00000393091 S100A14Q9HCY8 104 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 GLRX2Q9NS18 164 aa11.92□□□□□ -0.5
USP44-202ENST00000393091 MT-ND1P03886 318 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 CRHP06850 196 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 ASAH2BP0C7U1 165 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 TNFRSF1BP20333 461 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 IL11P20809 199 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 CXCR1P25024 350 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 SLC9A3P48764 834 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 C1orf94Q6P1W5 598 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 SLC46A3Q7Z3Q1 461 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 CPNE4Q96A23 557 aaPredicted RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 DMRTA2Q96SC8 542 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 DEFB127Q9H1M4 99 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 ALKBH4Q9NXW9 302 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 MRPL39Q9NYK5 338 aaKnown RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 CELSR3Q9NYQ7 3312 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 CPSF4LA6NMK7 179 aaKnown RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 EIF1BO60739 113 aaKnown RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 IMPDH2P12268 514 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 TIMP3P35625 211 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 SUCLG1P53597 346 aaKnown RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 CSNK2A1P68400 391 aaPredicted RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 RBPJQ06330 500 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 FHL1Q13642 323 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 C1orf140Q5VVS0 124 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 RAET1LQ5VY80 246 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 SHQ1Q6PI26 577 aaKnown RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 TTC33Q6PID6 262 aaPredicted RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 LILRA2Q8N149 483 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 VANGL1Q8TAA9 524 aaPredicted RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 TMEM239Q8WW34 195 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 WNT2BQ93097 391 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 FNDC11Q9BVV2 318 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 SF3B5Q9BWJ5 86 aaKnown RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 MEPEQ9NQ76 525 aaPredicted RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 SELENONQ9NZV5 590 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 VDAC3Q9Y277 283 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 CORINQ9Y5Q5 1042 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 NCOA6Q14686 2063 aaPredicted RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 IGSF10Q6WRI0 2623 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 A0A0J9YW62 118 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 CLEC18AA5D8T8 446 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 ELOA3DA6NLF2 546 aaPredicted RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 CLOCKO15516 846 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 IGHMP01871 453 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 POU3F2P20265 443 aaPredicted RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 SLC35A1P78382 337 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 PIN1Q13526 163 aaPredicted RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 ELOA3BQ3SY89 546 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 PRR30Q53SZ7 412 aaPredicted RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 FAM69AQ5T7M9 428 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 CLEC18BQ6UXF7 455 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 SPATA24Q86W54 205 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 SVOPLQ8N434 492 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 CLEC18CQ8NCF0 446 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 ELOA3Q8NG57 546 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 RSRC1Q96IZ7 334 aaKnown RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 C8orf4Q9NR00 106 aa11.91□□□□□ -0.5
USP44-202ENST00000393091 FAM32AQ9Y421 112 aaKnown RBP11.91□□□□□ -0.5
USP44-202ENST00000393091 A0A1B0GTH9 108 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 NPIPA5E9PKD4 350 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 J3KTA2 159 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 SEC14L5O43304 696 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 WISP2O76076 250 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 DNAJA1P31689 397 aaKnown RBP11.9□□□□□ -0.5
USP44-202ENST00000393091 IDUAP35475 653 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 OMPP47874 163 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 GSSP48637 474 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 RPS3AP61247 264 aaKnown RBP11.9□□□□□ -0.5
USP44-202ENST00000393091 NFATC3Q12968 1075 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 ZNF74Q16587 644 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 WLSQ5T9L3 541 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 DEF8Q6ZN54 512 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 SLC7A13Q8TCU3 470 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 GPX7Q96SL4 187 aaPredicted RBP11.9□□□□□ -0.5
USP44-202ENST00000393091 TP63Q9H3D4 680 aaPredicted RBP11.9□□□□□ -0.5
USP44-202ENST00000393091 TIGARQ9NQ88 270 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 NPIPA1Q9UND3 350 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 A0A087WUU8 490 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 CYTIPO60759 359 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 TRAPPC6AO75865 159 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 CEACAM8P31997 349 aaPredicted RBP11.9□□□□□ -0.5
USP44-202ENST00000393091 PTGS2P35354 604 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 RFC3P40938 356 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 CA7P43166 264 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 UGT2B15P54855 530 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 ELF3P78545 371 aaPredicted RBP11.9□□□□□ -0.5
USP44-202ENST00000393091 HOXC5Q00444 222 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 STK11Q15831 433 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 MICAQ29983 383 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 ACSF3Q4G176 576 aaPredicted RBP11.9□□□□□ -0.5
USP44-202ENST00000393091 RIPPLY2Q5TAB7 128 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 FAHD1Q6P587 224 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 NKAIN4Q8IVV8 208 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 BOD1Q96IK1 185 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms