RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 CHST2Q9Y4C5 530 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 ADGRG4Q8IZF6 3080 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 CRYBG3Q68DQ2 2970 aa11.29□□□□□ -0.6
GGPS1-203ENST00000391855 IGKV3D-15A0A087WSY6 115 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 TMEM72A0PK05 275 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 ENO4A6NNW6 628 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 GPR171O14626 319 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 GKN3PP0CG01 181 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 CD1EP15812 388 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 CCKARP32238 428 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 MTPNP58546 118 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 NCALDP61601 193 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 INTS11Q5TA45 600 aaKnown RBP11.28□□□□□ -0.6
GGPS1-203ENST00000391855 TFAP2EQ6VUC0 442 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 TUSC5Q8IXB3 177 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 C10orf111Q8N326 155 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 OR8J3Q8NGG0 315 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 C10orf82Q8WW14 230 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 ARL5BQ96KC2 179 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 USB1Q9BQ65 265 aaKnown RBP11.28□□□□□ -0.6
GGPS1-203ENST00000391855 GPATCH1Q9BRR8 931 aaKnown RBP11.28□□□□□ -0.6
GGPS1-203ENST00000391855 NAA11Q9BSU3 229 aaPredicted RBP11.28□□□□□ -0.6
GGPS1-203ENST00000391855 POLDIP3Q9BY77 421 aaKnown RBP11.28□□□□□ -0.6
GGPS1-203ENST00000391855 CLEC4MQ9H2X3 399 aaPredicted RBP11.28□□□□□ -0.6
GGPS1-203ENST00000391855 C12orf49Q9H741 205 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 KAT8Q9H7Z6 458 aaKnown RBP11.28□□□□□ -0.6
GGPS1-203ENST00000391855 RPS6KB2Q9UBS0 482 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 TESQ9UGI8 421 aaKnown RBP11.28□□□□□ -0.6
GGPS1-203ENST00000391855 GPR52Q9Y2T5 361 aa11.28□□□□□ -0.6
GGPS1-203ENST00000391855 IGHV3-15A0A0B4J1V0 119 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 A8MVM7 634 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 MRASO14807 208 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 CCDC22O60826 627 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 CNOT4O95628 575 aaKnown RBP11.27□□□□□ -0.6
GGPS1-203ENST00000391855 GPIP06744 558 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 CCNA2P20248 432 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 PSMB1P20618 241 aaKnown RBP11.27□□□□□ -0.6
GGPS1-203ENST00000391855 PCGF2P35227 344 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 IDUAP35475 653 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 SLC16A1P53985 500 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 PCBP3P57721 371 aaKnown RBP11.27□□□□□ -0.6
GGPS1-203ENST00000391855 OR2B6P58173 313 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 KRTAP10-9P60411 292 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 ADRM1Q16186 407 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 EXOC3L2Q2M3D2 409 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 FBXW10Q5XX13 1052 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 REP15Q6BDI9 236 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 C5orf46Q6UWT4 87 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 C6orf89Q6UWU4 347 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 GALNT5Q7Z7M9 940 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 PATL1Q86TB9 770 aaKnown RBP11.27□□□□□ -0.6
GGPS1-203ENST00000391855 PTOV1Q86YD1 416 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 ARMC8Q8IUR7 673 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 STK35Q8TDR2 534 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 RASSF5Q8WWW0 418 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 MED18Q9BUE0 208 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 TAPBPLQ9BX59 468 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 HDHD5Q9BXW7 423 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 TRIM2Q9C040 744 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 OR11A1Q9GZK7 315 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 NSRP1Q9H0G5 558 aaKnown RBP11.27□□□□□ -0.6
GGPS1-203ENST00000391855 GID8Q9NWU2 228 aa11.27□□□□□ -0.6
GGPS1-203ENST00000391855 ITPR2Q14571 2701 aa11.27□□□□□ -0.61
GGPS1-203ENST00000391855 CENPEQ02224 2701 aa11.27□□□□□ -0.61
GGPS1-203ENST00000391855 FXYD1O00168 92 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 FBP2O00757 339 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 PRG2P13727 222 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 OR3A2P47893 321 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 RGS8P57771 180 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 H3F3AP84243 136 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 SELPLGQ14242 412 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 P2RY6Q15077 328 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 PAQR6Q6TCH4 344 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 STAC2Q6ZMT1 411 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 NUFIP2Q7Z417 695 aaKnown RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 ARPINQ7Z6K5 226 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 ATG4DQ86TL0 474 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 SNX32Q86XE0 403 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 LSMEM1Q8N8F7 131 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 STEAP2Q8NFT2 490 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 DNAJA4Q8WW22 397 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 C3orf49Q96BT1 292 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 LRRC58Q96CX6 371 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 KLHL4Q9C0H6 718 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 PIF1Q9H611 641 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 ING1Q9UK53 422 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 AP3M1Q9Y2T2 418 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 ELOA3DA6NLF2 546 aaPredicted RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 ZNF716A6NP11 495 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 TMEM229AB2RXF0 380 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 MFN2O95140 757 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 AHSA1O95433 338 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 HRGP04196 525 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 C8BP07358 591 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 PNMTP11086 282 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 IMPDH2P12268 514 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 CRYGSP22914 178 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 AQP1P29972 269 aa11.26□□□□□ -0.61
GGPS1-203ENST00000391855 CAPRIN1Q14444 709 aaKnown RBP11.26□□□□□ -0.61
GGPS1-203ENST00000391855 VMACQ2NL98 169 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms