RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 DNAJA4Q8WW22 397 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 GMPPAQ96IJ6 420 aaPredicted RBP13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 OR11A1Q9GZK7 315 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 PIGMQ9H3S5 423 aa13.46□□□□□ -0.25
IGHV3-53-201ENST00000390627 MED12LQ86YW9 2145 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 PTPN13Q12923 2485 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 A0A1B0GWA3 101 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 ELOA3DA6NLF2 546 aaPredicted RBP13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 A8MVM7 634 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 EEF1E1-BLOC1S5C9J1V9 151 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 CXCR6O00574 342 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 EEF1E1O43324 174 aaKnown RBP13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 TNFSF13O75888 250 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 PNMTP11086 282 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 CALB2P22676 271 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 AGFG1P52594 562 aaKnown RBP13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 CTBP2P56545 445 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 ELOA3BQ3SY89 546 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 CYBRD1Q53TN4 286 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 ALG10BQ5I7T1 473 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 ULK3Q6PHR2 472 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 FCRLAQ7L513 359 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 ELOA3Q8NG57 546 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 OR6T1Q8NGN1 323 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 STK35Q8TDR2 534 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 ROBO4Q8WZ75 1007 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 LZICQ8WZA0 190 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 NSL1Q96IY1 281 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 ARL5BQ96KC2 179 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 MCHR1Q99705 422 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 POTEKPQ9BYX7 375 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 GP6Q9HCN6 339 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 ADPRHL2Q9NX46 363 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 PACSIN3Q9UKS6 424 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 TRAPPC4Q9Y296 219 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 EMC9Q9Y3B6 208 aa13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 USP9YO00507 2555 aaPredicted RBP13.45□□□□□ -0.26
IGHV3-53-201ENST00000390627 COL12A1Q99715 3063 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 INTS1Q8N201 2190 aaKnown RBP13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 ZC3H12DA2A288 527 aaKnown RBP13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 TMEM229AB2RXF0 380 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 SS18L1O75177 396 aaPredicted RBP13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 GMNNO75496 209 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 GRNP28799 593 aaKnown RBP13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 IDUAP35475 653 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 OR2B6P58173 313 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 SIRPAP78324 504 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 SLC25A3Q00325 362 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 TFF3Q07654 80 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 GUSBP1Q15486 140 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 OR1Q1Q15612 314 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 FBXL19-AS1Q494R0 122 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 SAMD4BQ5PRF9 694 aaKnown RBP13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 SWT1Q5T5J6 900 aaKnown RBP13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 ZNF613Q6PF04 617 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 C5orf46Q6UWT4 87 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 FAM214BQ7L5A3 538 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 TRPM8Q7Z2W7 1104 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 VANGL1Q8TAA9 524 aaPredicted RBP13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 ABHD3Q8WU67 409 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 SLC47A1Q96FL8 570 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 TACO1Q9BSH4 297 aaKnown RBP13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 KLHL9Q9P2J3 617 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 GMPR2Q9P2T1 348 aaKnown RBP13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 FOXD3Q9UJU5 478 aaPredicted RBP13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 SH3GLB1Q9Y371 365 aa13.44□□□□□ -0.26
IGHV3-53-201ENST00000390627 IGHV3-15A0A0B4J1V0 119 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 A0A0B4J2E0 115 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 A0A1B0GX12 115 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 MSTNO14793 375 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 TPST2O60704 377 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 EIF1BO60739 113 aaKnown RBP13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 PRKD3O94806 890 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 AHSA1O95433 338 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 KIR2DL2P43627 348 aaPredicted RBP13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 SELENOWP63302 87 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 SLC35A1P78382 337 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 BNIP2Q12982 314 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 SPATS1Q496A3 300 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 SP5Q6BEB4 398 aaPredicted RBP13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 VWA1Q6PCB0 445 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 CARM1Q86X55 608 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 DEFB107AQ8IZN7 70 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 OR6K3Q8NGY3 331 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 RNF217Q8TC41 542 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 RNASE6Q93091 150 aaKnown RBP13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 FAM162AQ96A26 154 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 DNAJA3Q96EY1 480 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 TPD52L3Q96J77 140 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 WFDC6Q9BQY6 131 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 PRR14Q9BWN1 585 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 TAPBPLQ9BX59 468 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 PCDHAC1Q9H158 963 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 JKAMPQ9P055 326 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 KLHL13Q9P2N7 655 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 CLEC4AQ9UMR7 237 aa13.43□□□□□ -0.26
IGHV3-53-201ENST00000390627 CPSF4LA6NMK7 179 aaKnown RBP13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 B2RBV5 119 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 C19orf84I3L1E1 186 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 SMAD9O15198 467 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms