RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 OR7G3Q8NG95 312 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 OR2Y1Q8NGV0 311 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 ROPN1LQ96C74 230 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 KCNA7Q96RP8 456 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 C1orf198Q9H425 327 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 ZIM2Q9NZV7 527 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 ACSL6Q9UKU0 697 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 PRSS21Q9Y6M0 314 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 A6NHS1 94 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 DOK2O60496 412 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 DHFRP00374 187 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 MMP11P24347 488 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 DBPQ10586 325 aaPredicted RBP8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 FADDQ13158 208 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 PARP8Q8N3A8 854 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 EIF1ADQ8N9N8 165 aaKnown RBP8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 OR1L3Q8NH93 324 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 SLC17A7Q9P2U7 560 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 MGAT4BQ9UQ53 548 aa8.51□□□□□ -1.05
LIMCH1-202ENST00000381753 KDM4EB2RXH2 506 aaPredicted RBP8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 GPR4P46093 362 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 MVKQ03426 396 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 IL18Q14116 193 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 MRGPREQ86SM8 312 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 GID4Q8IVV7 300 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 FAM109AQ8N4B1 249 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 SLC39A13Q96H72 371 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 UBE2J1Q9Y385 318 aaPredicted RBP8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 TRIOBPQ9H2D6 2365 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 A0A1W2PRD5 423 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 A0A1W2PRF3 423 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 A0A1W2PRM7 423 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 TCRBV7S2A1N4TA0A589 114 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 EFSO43281 561 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 SOX14O95416 240 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 IL12AP29459 219 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 SDC2P34741 201 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 ARSDP51689 593 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 DSCR4P56555 118 aaPredicted RBP8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 RPP30P78346 268 aaKnown RBP8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 TLE1Q04724 770 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 EMX2Q04743 252 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 DPTQ07507 201 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 ABHD17CQ6PCB6 329 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 P2RY8Q86VZ1 359 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 ZNF781Q8N8C0 355 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 OR51T1Q8NGJ9 327 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 SLC7A6OSQ96CW6 309 aaPredicted RBP8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 SPACA9Q96E40 222 aaPredicted RBP8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 DPH3Q96FX2 82 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 ABHD17AQ96GS6 310 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 TMEM208Q9BTX3 173 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 TMEM109Q9BVC6 243 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 LAMP3Q9UQV4 416 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 M0R233 179 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 PRAMEF4O60810 478 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 CD1DP15813 335 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 AMY2BP19961 511 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 SLC2A5P22732 501 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 F2RP25116 425 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 PCSK6P29122 969 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 GSK3AP49840 483 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 KCNJ11Q14654 390 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 ITPAQ9BY32 194 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 TPK1Q9H3S4 243 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 A0A087WZY1 265 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 A0A0B4J203 849 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 CENPBD1B2RD01 187 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 SSX4O60224 188 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 SLC16A7O60669 478 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 CHMP24386 653 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 SEC61A1P61619 476 aaKnown RBP8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 SELENBP1Q13228 472 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 C18orf21Q32NC0 220 aaPredicted RBP8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 CYBRD1Q53TN4 286 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 Q6ZTK2 550 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 FOXRED2Q8IWF2 684 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 TMEM59Q9BXS4 323 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 NME7Q9Y5B8 376 aa8.5□□□□□ -1.05
LIMCH1-202ENST00000381753 IGHV3-15A0A0B4J1V0 119 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 A0A0G2JMP0 313 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 C5orf49A4QMS7 147 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 LRIT2A6NDA9 550 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 NDUFB2O95178 105 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 EPXP11678 715 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 MSR1P21757 451 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 GLRA1P23415 457 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 AOAHP28039 575 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 RPS16P62249 146 aaKnown RBP8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 RAB31Q13636 194 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 ZNF615Q8N8J6 731 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 OR4M2Q8NGB6 313 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 MCFD2Q8NI22 146 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 TNFAIP8L1Q8WVP5 186 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 ASB12Q8WXK4 309 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 PIGTQ969N2 578 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 AIFM2Q9BRQ8 373 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 ZFP64Q9NPA5 681 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 SAR1AQ9NR31 198 aa8.49□□□□□ -1.05
LIMCH1-202ENST00000381753 AMDHD2Q9Y303 409 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms