RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 HDXQ7Z353 690 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 PEX5LQ8IYB4 626 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 CIARTQ8N365 385 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-202ENST00000381208 OR52E6Q96RD3 313 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 ZNF300Q96RE9 604 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-202ENST00000381208 NAA11Q9BSU3 229 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-202ENST00000381208 PNPOQ9NVS9 261 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 ASB6Q9NWX5 421 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 THUMPD1Q9NXG2 353 aaKnown RBP11.48□□□□□ -0.57
RPAIN-202ENST00000381208 TAS2R16Q9NYV7 291 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 TMEM181Q9P2C4 612 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 MALT1Q9UDY8 824 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 PRSS50Q9UI38 385 aa11.48□□□□□ -0.57
RPAIN-202ENST00000381208 GOLGA8QA0A0J9YX86 632 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 CIB4A0PJX0 185 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 GOLGA8OA6NCC3 632 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 DPRXA6NFQ7 191 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 CFAP73A6NFT4 308 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 ZNF716A6NP11 495 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 GOLGA8NF8WBI6 632 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 SDHDO14521 159 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 NR2F1P10589 423 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 IGHV1-2P23083 117 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 PTAFRP25105 342 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 SLC1A3P43003 542 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 IDH2P48735 452 aaKnown RBP11.47□□□□□ -0.57
RPAIN-202ENST00000381208 CASP9P55211 416 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 UFM1P61960 85 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 TGFBR3Q03167 851 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 MPP2Q14168 576 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 TMEM108Q6UXF1 575 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 MSANTD1Q6ZTZ1 278 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 ADGRG3Q86Y34 549 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 UBE2J2Q8N2K1 259 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 ZNF433Q8N7K0 673 aaPredicted RBP11.47□□□□□ -0.57
RPAIN-202ENST00000381208 LILRB1Q8NHL6 650 aaPredicted RBP11.47□□□□□ -0.57
RPAIN-202ENST00000381208 WDR60Q8WVS4 1066 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 ZG16BQ96DA0 208 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 TRIM2Q9C040 744 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 SLC38A1Q9H2H9 487 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 PIF1Q9H611 641 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 ARMC7Q9H6L4 198 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 CACYBPQ9HB71 228 aaKnown RBP11.47□□□□□ -0.57
RPAIN-202ENST00000381208 ZNF446Q9NWS9 450 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 CISD1Q9NZ45 108 aaKnown RBP11.47□□□□□ -0.57
RPAIN-202ENST00000381208 SLC9A8Q9Y2E8 581 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 GPR45Q9Y5Y3 372 aa11.47□□□□□ -0.57
RPAIN-202ENST00000381208 TMED7-TICAM2A0A0A6YYA0 188 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 TMEM247A6NEH6 219 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 C9JVG2 144 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 RFXANKO14593 260 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 SNNO75324 88 aaPredicted RBP11.46□□□□□ -0.57
RPAIN-202ENST00000381208 SOD3P08294 240 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 ALDOCP09972 364 aaKnown RBP11.46□□□□□ -0.57
RPAIN-202ENST00000381208 ZCCHC18P0CG32 403 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 RPS4Y1P22090 263 aaKnown RBP11.46□□□□□ -0.57
RPAIN-202ENST00000381208 PAX7P23759 505 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 OR2B6P58173 313 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 H3F3AP84243 136 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 NRF1Q16656 503 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 CLEC12BQ2HXU8 276 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 PDCD4Q53EL6 469 aaKnown RBP11.46□□□□□ -0.57
RPAIN-202ENST00000381208 BEND6Q5SZJ8 279 aaPredicted RBP11.46□□□□□ -0.57
RPAIN-202ENST00000381208 AGAP6Q5VW22 663 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 PAQR6Q6TCH4 344 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 SEZ6L2Q6UXD5 910 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 OLIG3Q7RTU3 272 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 DTX2Q86UW9 622 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 DEPDC4Q8N2C3 294 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 C17orf78Q8N4C9 275 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 ARL5BQ96KC2 179 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 TEX37Q96LM6 180 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 RMND5AQ9H871 391 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 FAM53CQ9NYF3 392 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 NKIRAS1Q9NYS0 192 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 P2RX2Q9UBL9 471 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 OSGIN1Q9UJX0 560 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 TMED7Q9Y3B3 224 aa11.46□□□□□ -0.57
RPAIN-202ENST00000381208 MAGED1Q9Y5V3 778 aaPredicted RBP11.46□□□□□ -0.57
RPAIN-202ENST00000381208 TMEM120BA0PK00 339 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 FAM234BA2RU67 622 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 PRAMEF27A3QJZ7 478 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 CCT8L1PA6NM43 557 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 SLC22A3O75751 556 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 CHRM4P08173 479 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 EPHA3P29320 983 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 CRISP3P54108 245 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 CDH11P55287 796 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 NME5P56597 212 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 COPZ1P61923 177 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 EPS8Q12929 822 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 VEZF1Q14119 521 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 SYPL1Q16563 259 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 LIN52Q52LA3 116 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 MRPL2Q5T653 305 aaKnown RBP11.45□□□□□ -0.58
RPAIN-202ENST00000381208 ANKFN1Q8N957 763 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 ANKRD42Q8N9B4 389 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 C1orf162Q8NEQ5 155 aaPredicted RBP11.45□□□□□ -0.58
RPAIN-202ENST00000381208 KBTBD8Q8NFY9 601 aa11.45□□□□□ -0.58
RPAIN-202ENST00000381208 CNOT9Q92600 299 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms