RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CELP19835 753 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 CFL1P23528 166 aaKnown RBP21.15■□□□□ 0.98
VPS16-201ENST00000380443 CD79BP40259 229 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 EBPQ15125 230 aaKnown RBP21.15■□□□□ 0.98
VPS16-201ENST00000380443 RHBDD2Q6NTF9 364 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 KANSL1Q7Z3B3 1105 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 ZNF321PQ8N8H1 164 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 POMGNT2Q8NAT1 580 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 OR5M3Q8NGP4 307 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 HCAR1Q9BXC0 346 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 OR51V1Q9H2C8 321 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 KCNN2Q9H2S1 579 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 SYNDIG1Q9H7V2 258 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 RHBDL2Q9NX52 303 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 PCDHGB7Q9Y5F8 929 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 WDFY4Q6ZS81 3184 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 YKT6O15498 198 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 TBX1O43435 398 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 EIF4E2O60573 245 aaKnown RBP21.15■□□□□ 0.98
VPS16-201ENST00000380443 PTTG1O95997 202 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 APEHP13798 732 aaKnown RBP21.15■□□□□ 0.98
VPS16-201ENST00000380443 GRK6P43250 576 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 RPS4XP62701 263 aaKnown RBP21.15■□□□□ 0.98
VPS16-201ENST00000380443 NDUFAF6Q330K2 333 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 SLC35D3Q5M8T2 416 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 WDR5BQ86VZ2 330 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 KLBQ86Z14 1044 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 TM9SF2Q99805 663 aa21.15■□□□□ 0.98
VPS16-201ENST00000380443 A0A1B0GTQ1 180 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 IL12BP29460 328 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 SDC2P34741 201 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 PSMD7P51665 324 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 PNLIPRP2P54317 469 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 CSTF1Q05048 431 aaKnown RBP21.14■□□□□ 0.97
VPS16-201ENST00000380443 GGTLC2Q14390 218 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.14■□□□□ 0.97
VPS16-201ENST00000380443 ZNF528Q3MIS6 628 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 SLC22A16Q86VW1 577 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 TMEM99Q8N816 258 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 OR10H4Q8NGA5 316 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 MRPL48Q96GC5 212 aaKnown RBP21.14■□□□□ 0.97
VPS16-201ENST00000380443 ADGRL4Q9HBW9 690 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 NRIP3Q9NQ35 241 aa21.14■□□□□ 0.97
VPS16-201ENST00000380443 IMPA2O14732 288 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 RGS5O15539 181 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 REM1O75628 298 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 DHPSP49366 369 aaPredicted RBP21.13■□□□□ 0.97
VPS16-201ENST00000380443 HNRNPA0Q13151 305 aaKnown RBP21.13■□□□□ 0.97
VPS16-201ENST00000380443 IL10RAQ13651 578 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 CD226Q15762 336 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 VWA2Q5GFL6 755 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 STEAP3Q658P3 488 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 MAML2Q8IZL2 1156 aaPredicted RBP21.13■□□□□ 0.97
VPS16-201ENST00000380443 FAM98AQ8NCA5 519 aaKnown RBP21.13■□□□□ 0.97
VPS16-201ENST00000380443 PRSS33Q8NF86 280 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 OR52E2Q8NGJ4 325 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 SMPDL3BQ92485 455 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 ARSGQ96EG1 525 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 NUDT22Q9BRQ3 303 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 KATNB1Q9BVA0 655 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 VN1R1Q9GZP7 353 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 WWTR1Q9GZV5 400 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 PLEKHB1Q9UF11 243 aaPredicted RBP21.13■□□□□ 0.97
VPS16-201ENST00000380443 YARS2Q9Y2Z4 477 aaKnown RBP21.13■□□□□ 0.97
VPS16-201ENST00000380443 IER3IP1Q9Y5U9 82 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 IGLV3-12A0A075B6K2 115 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 GABRPO00591 440 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 RNF13O43567 381 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 TSPAN2O60636 221 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 HNRNPCP07910 306 aaKnown RBP eCLIP21.13■□□□□ 0.97
VPS16-201ENST00000380443 F8A1P23610 371 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 SLC16A1P53985 500 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 DDI2Q5TDH0 399 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 AGAP7PQ5VUJ5 663 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 PMS2CLQ68D20 193 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 SNX29P2Q8IUI4 249 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 FAM181AQ8N9Y4 354 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 LMF1Q96S06 567 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 ADOQ96SZ5 270 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 MKL2Q9ULH7 1088 aa21.13■□□□□ 0.97
VPS16-201ENST00000380443 IGKV1D-42A0A075B6H8 117 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 ALG1L2C9J202 215 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 RGS9O75916 674 aaPredicted RBP21.12■□□□□ 0.97
VPS16-201ENST00000380443 OR2T7P0C7T2 308 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 RPL4P36578 427 aaKnown RBP21.12■□□□□ 0.97
VPS16-201ENST00000380443 C9orf40Q8IXQ3 194 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 OR2T27Q8NH04 317 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 ASB15Q8WXK1 588 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 GAL3ST4Q96RP7 486 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 TIMP4Q99727 224 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 SLC7A5P2Q9GIP4 190 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 ADAM19Q9H013 955 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 TPK1Q9H3S4 243 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 HIF3AQ9Y2N7 669 aa21.12■□□□□ 0.97
VPS16-201ENST00000380443 CASKO14936 926 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 PLPP2O43688 288 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 SP9P0CG40 484 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 HIST1H1CP16403 213 aaKnown RBP21.11■□□□□ 0.97
VPS16-201ENST00000380443 RANBP1P43487 201 aa21.11■□□□□ 0.97
VPS16-201ENST00000380443 PRAMEF17Q5VTA0 474 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms