RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 MUS81Q96NY9 551 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 NAA11Q9BSU3 229 aaPredicted RBP20.27■□□□□ 0.84
U2AF1-202ENST00000380276 DPY30Q9C005 99 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 TMEM181Q9P2C4 612 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 AMDHD2Q9Y303 409 aa20.27■□□□□ 0.84
U2AF1-202ENST00000380276 CLDN24A6NM45 220 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 CSF3P09919 207 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 IGHV4-31P0DP07 118 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 CDH2P19022 906 aaPredicted RBP20.26■□□□□ 0.83
U2AF1-202ENST00000380276 USF1P22415 310 aaPredicted RBP20.26■□□□□ 0.83
U2AF1-202ENST00000380276 UQCRC2P22695 453 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 EFNA4P52798 201 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 SLC16A1P53985 500 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 IFFO1Q0D2I5 559 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 GGTLC2Q14390 218 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 CARTPTQ16568 116 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 FRRS1Q6ZNA5 592 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 ADGRG3Q86Y34 549 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 RIBC1Q8N443 379 aaPredicted RBP20.26■□□□□ 0.83
U2AF1-202ENST00000380276 WDR31Q8NA23 367 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 FAM71CQ8NEG0 241 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 DDIT4LQ96D03 193 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 FBXO17Q96EF6 278 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 CHODLQ9H9P2 273 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 SLC17A5Q9NRA2 495 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 POLE3Q9NRF9 147 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 PARPBPQ9NWS1 579 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 SLC9A8Q9Y2E8 581 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 MXRA5Q9NR99 2828 aa20.26■□□□□ 0.83
U2AF1-202ENST00000380276 TMED7-TICAM2A0A0A6YYA0 188 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 ATP6V1G2-DDX39BF2Z307 99 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 FKBP2P26885 142 aaKnown RBP20.25■□□□□ 0.83
U2AF1-202ENST00000380276 APOBEC3AP31941 199 aaPredicted RBP20.25■□□□□ 0.83
U2AF1-202ENST00000380276 CLK1P49759 484 aaKnown RBP20.25■□□□□ 0.83
U2AF1-202ENST00000380276 PHC1P78364 1004 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 KCNJ10P78508 379 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 LSM11P83369 360 aaKnown RBP eCLIP20.25■□□□□ 0.83
U2AF1-202ENST00000380276 TGFBR3Q03167 851 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 ARIH2OSQ8N7S6 290 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 VPS37AQ8NEZ2 397 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 MIPOL1Q8TD10 442 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 PROX1Q92786 737 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 C3orf49Q96BT1 292 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 SLC7A10Q9NS82 523 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 MARCOQ9UEW3 520 aaPredicted RBP20.25■□□□□ 0.83
U2AF1-202ENST00000380276 TMED7Q9Y3B3 224 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 ALPK2Q86TB3 2170 aa20.25■□□□□ 0.83
U2AF1-202ENST00000380276 AP3D1O14617 1153 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 LMX1BO60663 402 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 BPGMP07738 259 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 HTR3AP46098 478 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 SLC35A1P78382 337 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 SLC25A3Q00325 362 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 FUT5Q11128 374 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 TSPO2Q5TGU0 170 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 ANXA8L1Q5VT79 327 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 IL17RELQ6ZVW7 336 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 C17orf78Q8N4C9 275 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 CNOT9Q92600 299 aaKnown RBP20.24■□□□□ 0.83
U2AF1-202ENST00000380276 ZG16BQ96DA0 208 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 EXOSC3Q9NQT5 275 aaKnown RBP20.24■□□□□ 0.83
U2AF1-202ENST00000380276 TMEM160Q9NX00 188 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 ASIC5Q9NY37 505 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 DCTN4Q9UJW0 460 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 KCNS2Q9ULS6 477 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 MOKQ9UQ07 419 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 TRAPPC4Q9Y296 219 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 FLVCR1Q9Y5Y0 555 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 FKBP7Q9Y680 259 aa20.24■□□□□ 0.83
U2AF1-202ENST00000380276 TMEM72A0PK05 275 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 EIF1BO60739 113 aaKnown RBP20.23■□□□□ 0.83
U2AF1-202ENST00000380276 WNT11O96014 354 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 PDLIM4P50479 330 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 POLR2HP52434 150 aaKnown RBP20.23■□□□□ 0.83
U2AF1-202ENST00000380276 PRPS1P60891 318 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 KRTAP24-1Q3LI83 254 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 NUDCD3Q8IVD9 361 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 C1orf162Q8NEQ5 155 aaPredicted RBP20.23■□□□□ 0.83
U2AF1-202ENST00000380276 OR8J2Q8NGG1 315 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 OIT3Q8WWZ8 545 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 KCNS3Q9BQ31 491 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 SLC35A5Q9BS91 424 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 AKTIPQ9H8T0 292 aa20.23■□□□□ 0.83
U2AF1-202ENST00000380276 STAB1Q9NY15 2570 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 PRSS51A0A1B0GVH4 220 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 WDR91A4D1P6 747 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 KRT33AO76009 404 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 F12P00748 615 aaPredicted RBP20.22■□□□□ 0.83
U2AF1-202ENST00000380276 IMPDH2P12268 514 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 SRD5A1P18405 259 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 TACR3P29371 465 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 GZMKP49863 264 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 OTUD3Q5T2D3 398 aaPredicted RBP20.22■□□□□ 0.83
U2AF1-202ENST00000380276 SAXO2Q658L1 398 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 PMM1Q92871 262 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 PKNOX2Q96KN3 472 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 PIMREGQ9BSJ6 248 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 SAP130Q9H0E3 1048 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 OSGIN1Q9UJX0 560 aa20.22■□□□□ 0.83
U2AF1-202ENST00000380276 PDLIM1O00151 329 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms