RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 CSF2RBP32927 897 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 OR1D4P47884 311 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 DEFA1P59665 94 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 DEFA3P59666 94 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 PRPS1P60891 318 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 CFHR1Q03591 330 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 SQSTM1Q13501 440 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 GALEQ14376 348 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 NNATQ16517 81 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC35F1Q5T1Q4 408 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 ARHGAP40Q5TG30 622 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 HLA-DQA1Q5Y7H0 255 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 UNQ6494/PRO21346Q6UXR6 183 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 DPY19L2P2Q6ZN68 376 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 ATP6V1C2Q8NEY4 427 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 OR4C3Q8NH37 302 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 OR51A7Q8NH64 312 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF721Q8TF20 911 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 SPRYD4Q8WW59 207 aaPredicted RBP9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 LIPHQ8WWY8 451 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 KISS1RQ969F8 398 aaPredicted RBP9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 NACC2Q96BF6 587 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 OTULINQ96BN8 352 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 C3orf49Q96BT1 292 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF501Q96CX3 271 aaPredicted RBP9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 TNFRSF13CQ96RJ3 184 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 TEAD3Q99594 435 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 ALG8Q9BVK2 526 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 NDEL1Q9GZM8 345 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 ARRDC1-AS1Q9H2J1 176 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 CPNE5Q9HCH3 593 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 TRIM36Q9NQ86 728 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 ABCB10Q9NRK6 738 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 SNTG1Q9NSN8 517 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 RHBDL2Q9NX52 303 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 COPS7AQ9UBW8 275 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 CHRNA9Q9UGM1 479 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 SUSD2Q9UGT4 822 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 SLC6A5Q9Y345 797 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 PCDHGB6Q9Y5F9 930 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 FLNBO75369 2602 aaKnown RBP9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 PCDH15Q96QU1 1955 aa9.6□□□□□ -0.87
POLR2J3-201ENST00000379340 C2orf92A0A1B0GVN3 265 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ELOA3DA6NLF2 546 aaPredicted RBP9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ARPC3O15145 178 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF264O43296 627 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 UTS2O95399 124 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 DDAH2O95865 285 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 MT-ND5P03915 603 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 NGFRP08138 427 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ANKRD34CP0C6C1 535 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 RPS7P62081 194 aaKnown RBP9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ACY1Q03154 408 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 LGALS3BPQ08380 585 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 SKP2Q13309 424 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 FHL1Q13642 323 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ZNF791Q3KP31 576 aaPredicted RBP9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 TBC1D25Q3MII6 688 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ELOA3BQ3SY89 546 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 KLHL12Q53G59 568 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 STPG1Q5TH74 334 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 LYSMD4Q5XG99 296 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 C22orf42Q6IC83 251 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 TMEM71Q6P5X7 295 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 RABEPKQ7Z6M1 372 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 POMGNT2Q8NAT1 580 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 PLPP5Q8NEB5 264 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 C17orf47Q8NEP4 570 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ELOA3Q8NG57 546 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 PTP4A1Q93096 173 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 TSLPQ969D9 159 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ADIPOR1Q96A54 375 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 EFHD2Q96C19 240 aaPredicted RBP9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 MRPL48Q96GC5 212 aaKnown RBP9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 GPX7Q96SL4 187 aaPredicted RBP9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 KCNS3Q9BQ31 491 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 BARHL1Q9BZE3 327 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 OR8D2Q9GZM6 311 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 LAT2Q9GZY6 243 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ENKD1Q9H0I2 346 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 NXF5Q9H1B4 397 aaKnown RBP9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 KCNN2Q9H2S1 579 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 TOR4AQ9NXH8 423 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 BABAM2Q9NXR7 383 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 WASF3Q9UPY6 502 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 CMAHPQ9Y471 501 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 PCDHGB7Q9Y5F8 929 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 NOX1Q9Y5S8 564 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 ITPR1Q14643 2758 aa9.59□□□□□ -0.87
POLR2J3-201ENST00000379340 OR2W5A6NFC9 320 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 GTPBP1O00178 669 aaKnown RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 CTDSP2O14595 271 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 YKT6O15498 198 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 TBX1O43435 398 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 EIF4E2O60573 245 aaKnown RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 HNRNPCP07910 306 aaKnown RBP eCLIP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 SBK2P0C263 348 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 APEHP13798 732 aaKnown RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 FOLR1P15328 257 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 EPHA8P29322 1005 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms