RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CCT8L1PA6NM43 557 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 INAFM1C9JVW0 142 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 ADAM11O75078 769 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 SLC22A3O75751 556 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 RAD51DO75771 328 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 PGM3O95394 542 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 IDUAP35475 653 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 MAGEA8P43361 318 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 PLAURQ03405 335 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 GSTA3Q16772 222 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 NXNQ6DKJ4 435 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 DNAJC14Q6Y2X3 702 aaPredicted RBP18.57■□□□□ 0.56
VSX1-201ENST00000376707 LRRC74BQ6ZQY2 392 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 SLC38A1Q9H2H9 487 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 CISD1Q9NZ45 108 aaKnown RBP18.57■□□□□ 0.56
VSX1-201ENST00000376707 ZIM2Q9NZV7 527 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 TMEM181Q9P2C4 612 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 FREM1Q5H8C1 2179 aa18.57■□□□□ 0.56
VSX1-201ENST00000376707 TMED7-TICAM2A0A0A6YYA0 188 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 AGAP5A6NIR3 686 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 AP3D1O14617 1153 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 RAMP1O60894 148 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 MRPL33O75394 65 aaKnown RBP18.56■□□□□ 0.56
VSX1-201ENST00000376707 GSNP06396 782 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 CHRM4P08173 479 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 NR2F1P10589 423 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 POLR2HP52434 150 aaKnown RBP18.56■□□□□ 0.56
VSX1-201ENST00000376707 CDH11P55287 796 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 PGGHGQ32M88 737 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 AGBL2Q5U5Z8 902 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 CCDC103Q8IW40 242 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 PNPT1Q8TCS8 783 aaKnown RBP18.56■□□□□ 0.56
VSX1-201ENST00000376707 WDR60Q8WVS4 1066 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 PMM1Q92871 262 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 DDIT4LQ96D03 193 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 OR52B2Q96RD2 323 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 MTHFD2LQ9H903 347 aaPredicted RBP18.56■□□□□ 0.56
VSX1-201ENST00000376707 FAIMQ9NVQ4 179 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 ASB6Q9NWX5 421 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 NPAP1Q9NZP6 1156 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 TRAPPC4Q9Y296 219 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 TMED7Q9Y3B3 224 aa18.56■□□□□ 0.56
VSX1-201ENST00000376707 RFXANKO14593 260 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 ABCD4O14678 606 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 KRT75O95678 551 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 ZCCHC18P0CG32 403 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 UQCRBP14927 111 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 IL7RP16871 459 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 RPS4Y1P22090 263 aaKnown RBP18.55■□□□□ 0.56
VSX1-201ENST00000376707 MVDP53602 400 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 SLC16A1P53985 500 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 COX20Q5RI15 118 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 MSANTD1Q6ZTZ1 278 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 OR52N5Q8NH56 324 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 SLC6A13Q9NSD5 602 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 TAS2R16Q9NYV7 291 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 OSGIN1Q9UJX0 560 aa18.55■□□□□ 0.56
VSX1-201ENST00000376707 CFAP73A6NFT4 308 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 SHISA9B4DS77 424 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 RNF223E7ERA6 249 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 UBDO15205 165 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 ZNF208O43345 1280 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 EIF1BO60739 113 aaKnown RBP18.54■□□□□ 0.56
VSX1-201ENST00000376707 DBIP07108 87 aaKnown RBP18.54■□□□□ 0.56
VSX1-201ENST00000376707 TACR3P29371 465 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 SLC1A3P43003 542 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 SLC35A1P78382 337 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 MRPL2Q5T653 305 aaKnown RBP18.54■□□□□ 0.56
VSX1-201ENST00000376707 TMEM108Q6UXF1 575 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 RADILQ96JH8 1075 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 HS6ST2Q96MM7 605 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 NAA11Q9BSU3 229 aaPredicted RBP18.54■□□□□ 0.56
VSX1-201ENST00000376707 TRAF4Q9BUZ4 470 aaPredicted RBP18.54■□□□□ 0.56
VSX1-201ENST00000376707 SLCO5A1Q9H2Y9 848 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 MALT1Q9UDY8 824 aa18.54■□□□□ 0.56
VSX1-201ENST00000376707 HIVEP2P31629 2446 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 TMEM72A0PK05 275 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 FAAHO00519 579 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 NTF4P34130 210 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 ACVR1BP36896 505 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 ZNF83P51522 516 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 MAP2K6P52564 334 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 MAPK11Q15759 364 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 KLHL17Q6TDP4 642 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 EPGNQ6UW88 154 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 CASP12Q6UXS9 341 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 PRIMA1Q86XR5 153 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 PEX5LQ8IYB4 626 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 C7orf26Q96N11 449 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 PARPBPQ9NWS1 579 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 MGAT4BQ9UQ53 548 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 USH1CQ9Y6N9 552 aa18.53■□□□□ 0.56
VSX1-201ENST00000376707 CD8AP01732 235 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 IGHV4-39P01824 125 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 IMPDH2P12268 514 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 PTAFRP25105 342 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 MRPL19P49406 292 aaKnown RBP18.52■□□□□ 0.56
VSX1-201ENST00000376707 POLR2JP52435 117 aaKnown RBP18.52■□□□□ 0.56
VSX1-201ENST00000376707 H3F3AP84243 136 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 EPS8Q12929 822 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms