RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 MREGQ8N565 214 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 ARFGAP2Q8N6H7 521 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 SLC25A43Q8WUT9 341 aaPredicted RBP11.56□□□□□ -0.56
RPF1-201ENST00000370654 APH1AQ96BI3 265 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 MUCL1Q96DR8 90 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 WDR55Q9H6Y2 383 aaPredicted RBP11.56□□□□□ -0.56
RPF1-201ENST00000370654 EXOSC3Q9NQT5 275 aaKnown RBP11.56□□□□□ -0.56
RPF1-201ENST00000370654 POLE3Q9NRF9 147 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.56□□□□□ -0.56
RPF1-201ENST00000370654 RLIMQ9NVW2 624 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 BTNL2Q9UIR0 455 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.56□□□□□ -0.56
RPF1-201ENST00000370654 TMED7Q9Y3B3 224 aa11.56□□□□□ -0.56
RPF1-201ENST00000370654 CIB4A0PJX0 185 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 CCDC154A6NI56 674 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 AGAP5A6NIR3 686 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 CCT8L1PA6NM43 557 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 RGS16O15492 202 aaPredicted RBP11.55□□□□□ -0.56
RPF1-201ENST00000370654 RPS4Y1P22090 263 aaKnown RBP11.55□□□□□ -0.56
RPF1-201ENST00000370654 CD40P25942 277 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 TACR3P29371 465 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 MVDP53602 400 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 STX3Q13277 289 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 TSPO2Q5TGU0 170 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 ARL8AQ96BM9 186 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 MUS81Q96NY9 551 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 USB1Q9BQ65 265 aaKnown RBP11.55□□□□□ -0.56
RPF1-201ENST00000370654 CACNG6Q9BXT2 260 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 PARD6BQ9BYG5 372 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 SLC7A10Q9NS82 523 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 AIG1Q9NVV5 245 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 EMC3Q9P0I2 261 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 TMEM181Q9P2C4 612 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 HDGFL3Q9Y3E1 203 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 FLVCR1Q9Y5Y0 555 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 GPR45Q9Y5Y3 372 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 PLCE1Q9P212 2302 aa11.55□□□□□ -0.56
RPF1-201ENST00000370654 M0R1B8 84 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 AGR2O95994 175 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 GKN3PP0CG01 181 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 TTKP33981 857 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 WDR4P57081 412 aaKnown RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 LGALS3BPQ08380 585 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 EPS8Q12929 822 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 BNIP2Q12982 314 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 MRPL2Q5T653 305 aaKnown RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 OGFOD2Q6N063 350 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 CXXC5Q7LFL8 322 aaKnown RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 P2RY8Q86VZ1 359 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 VRK2Q86Y07 508 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 ZIC4Q8N9L1 334 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 PIGXQ8TBF5 258 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 HS6ST2Q96MM7 605 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 ZNF385AQ96PM9 386 aaKnown RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 TRNT1Q96Q11 434 aaKnown RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 GRIP2Q9C0E4 1043 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 CENPHQ9H3R5 247 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 ALG2Q9H553 416 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 SSU72Q9NP77 194 aaKnown RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 KCNK9Q9NPC2 374 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 YAE1D1Q9NRH1 226 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 ASB6Q9NWX5 421 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 TAS2R16Q9NYV7 291 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 MALT1Q9UDY8 824 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 CHST2Q9Y4C5 530 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 TM9SF1O15321 606 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 CD5LO43866 347 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 MRPL33O75394 65 aaKnown RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 LY6HO94772 140 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 PGRP06401 933 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 PRG2P13727 222 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 EPHA3P29320 983 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 POLR2HP52434 150 aaKnown RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 CLNS1AP54105 237 aaKnown RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 SLC17A1Q14916 467 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 ETFDHQ16134 617 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 GTDC1Q4AE62 458 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 CEP85LQ5SZL2 805 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 SLC22A25Q6T423 547 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 CASP12Q6UXS9 341 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 LRRC74BQ6ZQY2 392 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 ZNF621Q6ZSS3 439 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 TMEM99Q8N816 258 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 ANKRD42Q8N9B4 389 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 VPS37AQ8NEZ2 397 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 OR10H5Q8NGA6 315 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 OIT3Q8WWZ8 545 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 OR52E6Q96RD3 313 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 PANX1Q96RD7 426 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 DHRS9Q9BPW9 319 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 PAIP2Q9BPZ3 127 aaKnown RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 AMBRA1Q9C0C7 1298 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 ADAM19Q9H013 955 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 TRAPPC4Q9Y296 219 aa11.54□□□□□ -0.56
RPF1-201ENST00000370654 SPIN1Q9Y657 262 aaPredicted RBP11.54□□□□□ -0.56
RPF1-201ENST00000370654 FAM234BA2RU67 622 aa11.53□□□□□ -0.56
RPF1-201ENST00000370654 GPR171O14626 319 aa11.53□□□□□ -0.56
RPF1-201ENST00000370654 ZNF208O43345 1280 aa11.53□□□□□ -0.56
RPF1-201ENST00000370654 DNPH1O43598 174 aa11.53□□□□□ -0.56
RPF1-201ENST00000370654 AKR7A3O95154 331 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms