RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TGM7Q96PF1 710 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 DDOQ99489 341 aa14.84□□□□□ -0.03
COL17A1-202ENST00000369733 A0A0A6YYJ9 748 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 A0A0B4J2A0 478 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 C9J4A7 227 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 AKR7A2O43488 359 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 ADAMTS4O75173 837 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 RAB5CP51148 216 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 MORN1Q5T089 497 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 FAM71E1Q6IPT2 247 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 PGAP1Q75T13 922 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 CCDC71LQ8N9Z2 235 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 OR5T1Q8NG75 326 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 NPRL2Q8WTW4 380 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 GLYATL2Q8WU03 294 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 ZDHHC12Q96GR4 267 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 OPALINQ96PE5 141 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 NOX4Q9NPH5 578 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 SIDT1Q9NXL6 827 aaKnown RBP14.83□□□□□ -0.03
COL17A1-202ENST00000369733 SHPKQ9UHJ6 478 aa14.83□□□□□ -0.03
COL17A1-202ENST00000369733 OR6C65A6NJZ3 312 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 ZAR1LA6NP61 321 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 RAF1P04049 648 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 IGFBP1P08833 259 aaPredicted RBP14.83□□□□□ -0.04
COL17A1-202ENST00000369733 PRKAR1BP31321 381 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 SNU13P55769 128 aaKnown RBP14.83□□□□□ -0.04
COL17A1-202ENST00000369733 FOXK2Q01167 660 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 GPR18Q14330 331 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 PRSS45Q7RTY3 260 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 ZNF740Q8NDX6 193 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 TM4SF18Q96CE8 201 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 ELOVL3Q9HB03 270 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 SERPINA5P05154 406 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 UBL4AP11441 157 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 TNK1Q13470 666 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 SFXN2Q96NB2 322 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 KLK8O60259 260 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 HNRNPA1P09651 372 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL17A1-202ENST00000369733 CDK3Q00526 305 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 TMEM244Q5VVB8 128 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 GAREM2Q75VX8 874 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 ADGRF3Q8IZF5 1079 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 LRRC46Q96FV0 321 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 TNFRSF13CQ96RJ3 184 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 LRP5O75197 1615 aa14.83□□□□□ -0.04
COL17A1-202ENST00000369733 HEPACAM2A8MVW5 462 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 SGK494L7N484 410 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 DVL2O14641 736 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 HTR3BO95264 441 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 APBB3O95704 486 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 THEGLP0DJG4 465 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 CPMP14384 443 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 VIPR2P41587 438 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 BAK1Q16611 211 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 ZMAT1Q5H9K5 638 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 AVPI1Q5T686 147 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 FAHD1Q6P587 224 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 C7orf61Q8IZ16 206 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 RTP3Q9BQQ7 232 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 PRR14Q9BWN1 585 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 RHBDD3Q9Y3P4 386 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 ATG4BQ9Y4P1 393 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 FBXO24O75426 580 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 EPHA2P29317 976 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 IDH3GP51553 393 aaPredicted RBP14.82□□□□□ -0.04
COL17A1-202ENST00000369733 CRMP1Q14194 572 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 PDSS1Q5T2R2 415 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 UNQ6126/PRO20091Q6UXV3 157 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 GDF7Q7Z4P5 450 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 TRAPPC6BQ86SZ2 158 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 SLC22A8Q8TCC7 542 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 DDIT4LQ96D03 193 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 FOXN4Q96NZ1 517 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 DCLRE1CQ96SD1 692 aaKnown RBP14.82□□□□□ -0.04
COL17A1-202ENST00000369733 EVA1AQ9H8M9 152 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 ENY2Q9NPA8 101 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 RDH16O75452 317 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 CYBAP13498 195 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 SLC6A8P48029 635 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 OLIG3Q7RTU3 272 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 OR1F2PQ96R84 312 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 LMF2Q9BU23 707 aaKnown RBP14.82□□□□□ -0.04
COL17A1-202ENST00000369733 ANKRD36CQ5JPF3 1778 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 A0A1B0GTL3 188 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 SYT5O00445 386 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 HOXB5P09067 269 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 GZMKP49863 264 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 MECP2P51608 486 aaKnown RBP14.82□□□□□ -0.04
COL17A1-202ENST00000369733 CLDN6P56747 220 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 TAS2R20P59543 309 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 SLC9A3R2Q15599 337 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 KANSL1Q7Z3B3 1105 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 CASD1Q96PB1 797 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 SLIRPQ9GZT3 109 aaKnown RBP14.82□□□□□ -0.04
COL17A1-202ENST00000369733 NELFAQ9H3P2 528 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 LIN7BQ9HAP6 207 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 SLC2A4RGQ9NR83 387 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 FAM230AA0A1W2PPH8 454 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 SLC34A2O95436 690 aa14.82□□□□□ -0.04
COL17A1-202ENST00000369733 HLA-FP30511 346 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms