RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 J3KTA2 159 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 FCMRO60667 390 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 UGT2B11O75310 529 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 INMTO95050 263 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 CCNB2O95067 398 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 KCNK2O95069 426 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 UBTFL6P0CB48 400 aaPredicted RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 PRKACGP22612 351 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 YAP1P46937 504 aaKnown RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 PSMD4P55036 377 aaKnown RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 IL18R1Q13478 541 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 GANABQ14697 944 aaKnown RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 NSDHLQ15738 373 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 GPR68Q15743 365 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 ZSWIM7Q19AV6 140 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 ISXQ2M1V0 245 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 EXOC3L2Q2M3D2 409 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 VWA2Q5GFL6 755 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 ATPAF1Q5TC12 328 aaPredicted RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 RBM44Q6ZP01 1051 aaKnown RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 KCTD20Q7Z5Y7 419 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 VRK2Q86Y07 508 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 TMEM151BQ8IW70 566 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 ZNF615Q8N8J6 731 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 C9orf43Q8TAL5 461 aaPredicted RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 PTPMT1Q8WUK0 201 aaPredicted RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 TSLPQ969D9 159 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 POLR2J2Q9GZM3 115 aaKnown RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 POLR2J3Q9H1A7 115 aaKnown RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 ZNF696Q9H7X3 374 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 CHODLQ9H9P2 273 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 ZNF556Q9HAH1 456 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 ACER3Q9NUN7 267 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 MRPS18AQ9NVS2 196 aaKnown RBP8.01□□□□□ -1.13
TPM3-213ENST00000368545 FAM118AQ9NWS6 357 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 UBAP1Q9NZ09 502 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 CTSFQ9UBX1 484 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 TMCC3Q9ULS5 477 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 POFUT2Q9Y2G5 429 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 OR2W5A6NFC9 320 aa8□□□□□ -1.13
TPM3-213ENST00000368545 FAAHO00519 579 aa8□□□□□ -1.13
TPM3-213ENST00000368545 POLR1CO15160 346 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 NME6O75414 186 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 TOX4O94842 621 aa8□□□□□ -1.13
TPM3-213ENST00000368545 EPPINO95925 133 aa8□□□□□ -1.13
TPM3-213ENST00000368545 H1F0P07305 194 aaKnown RBP8□□□□□ -1.13
TPM3-213ENST00000368545 RAC2P15153 192 aa8□□□□□ -1.13
TPM3-213ENST00000368545 ABCD3P28288 659 aa8□□□□□ -1.13
TPM3-213ENST00000368545 PIGAP37287 484 aa8□□□□□ -1.13
TPM3-213ENST00000368545 DAPP51397 102 aa8□□□□□ -1.13
TPM3-213ENST00000368545 CCR9P51686 369 aa8□□□□□ -1.13
TPM3-213ENST00000368545 SLC37A1P57057 533 aa8□□□□□ -1.13
TPM3-213ENST00000368545 PSPHP78330 225 aa8□□□□□ -1.13
TPM3-213ENST00000368545 DGCR6Q14129 220 aa8□□□□□ -1.13
TPM3-213ENST00000368545 CCNJQ5T5M9 372 aa8□□□□□ -1.13
TPM3-213ENST00000368545 SEM1Q6ZVN7 128 aa8□□□□□ -1.13
TPM3-213ENST00000368545 OLIG3Q7RTU3 272 aa8□□□□□ -1.13
TPM3-213ENST00000368545 C8orf59Q8N0T1 100 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 BMPERQ8N8U9 685 aa8□□□□□ -1.13
TPM3-213ENST00000368545 OR6T1Q8NGN1 323 aa8□□□□□ -1.13
TPM3-213ENST00000368545 OR52J3Q8NH60 311 aa8□□□□□ -1.13
TPM3-213ENST00000368545 DOK4Q8TEW6 326 aa8□□□□□ -1.13
TPM3-213ENST00000368545 C3orf49Q96BT1 292 aa8□□□□□ -1.13
TPM3-213ENST00000368545 RNF125Q96EQ8 232 aa8□□□□□ -1.13
TPM3-213ENST00000368545 RMND5BQ96G75 393 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 SENP5Q96HI0 755 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 MRI1Q9BV20 369 aa8□□□□□ -1.13
TPM3-213ENST00000368545 FNDC11Q9BVV2 318 aa8□□□□□ -1.13
TPM3-213ENST00000368545 RSPO3Q9BXY4 272 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 SLC26A1Q9H2B4 701 aa8□□□□□ -1.13
TPM3-213ENST00000368545 NMNAT1Q9HAN9 279 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 FBXO8Q9NRD0 319 aa8□□□□□ -1.13
TPM3-213ENST00000368545 OCIAD1Q9NX40 245 aa8□□□□□ -1.13
TPM3-213ENST00000368545 COPS7AQ9UBW8 275 aa8□□□□□ -1.13
TPM3-213ENST00000368545 ZZEF1O43149 2961 aa8□□□□□ -1.13
TPM3-213ENST00000368545 OR6C76A6NM76 312 aa8□□□□□ -1.13
TPM3-213ENST00000368545 HRKO00198 91 aa8□□□□□ -1.13
TPM3-213ENST00000368545 AP3D1O14617 1153 aa8□□□□□ -1.13
TPM3-213ENST00000368545 FFAR1O14842 300 aa8□□□□□ -1.13
TPM3-213ENST00000368545 CLPSP04118 112 aa8□□□□□ -1.13
TPM3-213ENST00000368545 IGKV3-11P04433 115 aa8□□□□□ -1.13
TPM3-213ENST00000368545 GNAO1P09471 354 aa8□□□□□ -1.13
TPM3-213ENST00000368545 CSF1P09603 554 aa8□□□□□ -1.13
TPM3-213ENST00000368545 TPD52P55327 224 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 RGS8P57771 180 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 EEF1A1P68104 462 aaKnown RBP8□□□□□ -1.13
TPM3-213ENST00000368545 MC2RQ01718 297 aa8□□□□□ -1.13
TPM3-213ENST00000368545 KEAP1Q14145 624 aa8□□□□□ -1.13
TPM3-213ENST00000368545 ZIK1Q3SY52 487 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 PLA1AQ53H76 456 aa8□□□□□ -1.13
TPM3-213ENST00000368545 DCST1Q5T197 706 aa8□□□□□ -1.13
TPM3-213ENST00000368545 TMEM154Q6P9G4 183 aa8□□□□□ -1.13
TPM3-213ENST00000368545 TREML4Q6UXN2 200 aa8□□□□□ -1.13
TPM3-213ENST00000368545 ZNF836Q6ZNA1 936 aa8□□□□□ -1.13
TPM3-213ENST00000368545 B3GNT8Q7Z7M8 397 aa8□□□□□ -1.13
TPM3-213ENST00000368545 RANBP3LQ86VV4 465 aaPredicted RBP8□□□□□ -1.13
TPM3-213ENST00000368545 LACC1Q8IV20 430 aa8□□□□□ -1.13
TPM3-213ENST00000368545 OFCC1Q8IZS5 231 aa8□□□□□ -1.13
TPM3-213ENST00000368545 SLC38A9Q8NBW4 561 aa8□□□□□ -1.13
TPM3-213ENST00000368545 MORN4Q8NDC4 146 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms