RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 MYEOVQ96EZ4 313 aa11.99□□□□□ -0.49
PTPRK-207ENST00000368226 TMEM184BQ9Y519 407 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-207ENST00000368226 SERINC4A6NH21 518 aa11.99□□□□□ -0.49
PTPRK-207ENST00000368226 NRG2O14511 850 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-207ENST00000368226 ARPC1BO15143 372 aaKnown RBP11.99□□□□□ -0.49
PTPRK-207ENST00000368226 LYRM1O43325 122 aa11.99□□□□□ -0.49
PTPRK-207ENST00000368226 DDAH2O95865 285 aa11.99□□□□□ -0.49
PTPRK-207ENST00000368226 DPP4P27487 766 aa11.99□□□□□ -0.49
PTPRK-207ENST00000368226 DUSP6Q16828 381 aa11.99□□□□□ -0.49
PTPRK-207ENST00000368226 KDM8Q8N371 416 aa11.99□□□□□ -0.49
PTPRK-207ENST00000368226 MUCL1Q96DR8 90 aa11.99□□□□□ -0.49
PTPRK-207ENST00000368226 UBXN10Q96LJ8 280 aa11.99□□□□□ -0.49
PTPRK-207ENST00000368226 NMNAT3Q96T66 252 aa11.99□□□□□ -0.49
PTPRK-207ENST00000368226 ACOD1A6NK06 481 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 TIMM8AO60220 97 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 BCAS1O75363 584 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 SPDEFO95238 335 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 POLR2HP52434 150 aaKnown RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 CSNK1G2P78368 415 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 BPHLQ86WA6 291 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 ZNF808Q8N4W9 903 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 ZNF417Q8TAU3 575 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 ELSPBP1Q96BH3 223 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 FAM234AQ9H0X4 552 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 TMEM72A0PK05 275 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 GALR3O60755 368 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 CDK1P06493 297 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 CD27P26842 260 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 SLC16A9Q7RTY1 509 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 SNIP1Q8TAD8 396 aaKnown RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 S100PBPQ96BU1 408 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 CPPED1Q9BRF8 314 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 PRDM9Q9NQV7 894 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 PDE7AQ13946 482 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 SF3B4Q15427 424 aaKnown RBP eCLIP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 FBXW12Q6X9E4 464 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 RETREG3Q86VR2 466 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 SPARTQ8N0X7 666 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 TRUB1Q8WWH5 349 aaKnown RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 GGHQ92820 318 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 KHSRPQ92945 711 aaKnown RBP eCLIP11.98□□□□□ -0.492e-6■■□□□ 14.1
PTPRK-207ENST00000368226 THOC3Q96J01 351 aaKnown RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 PHB2Q99623 299 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 SYT3Q9BQG1 590 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 SLC6A14Q9UN76 642 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 ZNF736B4DX44 427 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 MMP2P08253 660 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 MSL3P1P0C860 447 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 ARAFP10398 606 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 TMEM52BQ4KMG9 183 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 ZNF681Q96N22 645 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 C1QTNF6Q9BXI9 259 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 MFRPQ9BY79 579 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 TMED7-TICAM2A0A0A6YYA0 188 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 H0YIV9 168 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 SOCS6O14544 535 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 ARPC5O15511 151 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 SERPINE2P07093 398 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 FCGR2AP12318 317 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 POLR2IP36954 125 aaKnown RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 GLB1L2Q8IW92 636 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 CMTM1Q8IZ96 169 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 OR4K15Q8NH41 348 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 TXNDC15Q96J42 360 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 TESQ9UGI8 421 aaKnown RBP11.98□□□□□ -0.49
PTPRK-207ENST00000368226 TMED7Q9Y3B3 224 aa11.98□□□□□ -0.49
PTPRK-207ENST00000368226 NOTOA8MTQ0 251 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 SLC22A5O76082 557 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 MAKP20794 623 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 RAB4BP61018 213 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 TMEM207Q6UWW9 146 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 ASCC1Q8N9N2 400 aaKnown RBP11.97□□□□□ -0.49
PTPRK-207ENST00000368226 ABHD11Q8NFV4 315 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 C8orf44Q96CB5 159 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 RSPRY1Q96DX4 576 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 ACSS1Q9NUB1 689 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-207ENST00000368226 DUSP13Q9UII6 198 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 SLC6A5Q9Y345 797 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 PHIPQ8WWQ0 1821 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 SHISA7A6NL88 538 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 TRAPPC2LH3BP13 241 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 CARD18P57730 90 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 PPP2CBP62714 309 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 PPP2CAP67775 309 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 EMX1Q04741 257 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-207ENST00000368226 RAB40BQ12829 278 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 C14orf28Q4W4Y0 310 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 MAFIPQ8WZ33 124 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 HHIPL1Q96JK4 782 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 LCORQ96JN0 433 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-207ENST00000368226 AMDHD1Q96NU7 426 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 MICU1Q9BPX6 476 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 TLCD2A6NGC4 264 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 AGPAT2O15120 278 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 DNAJB5O75953 348 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 NPPBP16860 134 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 PTAFRP25105 342 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 LIM2P55344 173 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 ZNF691Q5VV52 312 aa11.97□□□□□ -0.49
PTPRK-207ENST00000368226 ANKRD33Q7Z3H0 272 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms