RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ZNF426Q9BUY5 554 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 TBL1XR1Q9BZK7 514 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 LAT2Q9GZY6 243 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 ING2Q9H160 280 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 LIN28AQ9H9Z2 209 aaKnown RBP11.03□□□□□ -0.64
USF1-203ENST00000368021 REV1Q9UBZ9 1251 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 TMA7Q9Y2S6 64 aaKnown RBP11.03□□□□□ -0.64
USF1-203ENST00000368021 PTPRQQ9UMZ3 2332 aa11.03□□□□□ -0.64
USF1-203ENST00000368021 A0A1B0GWA3 101 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 GTPBP1O00178 669 aaKnown RBP11.02□□□□□ -0.64
USF1-203ENST00000368021 WWP2O00308 870 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 CDK2AP1O14519 115 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 EIF4E2O60573 245 aaKnown RBP11.02□□□□□ -0.64
USF1-203ENST00000368021 ICAM2P13598 275 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 RBM34P42696 430 aaKnown RBP11.02□□□□□ -0.64
USF1-203ENST00000368021 OMPP47874 163 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 SLC6A8P48029 635 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 TTC33Q6PID6 262 aaPredicted RBP11.02□□□□□ -0.64
USF1-203ENST00000368021 NUP54Q7Z3B4 507 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 MISPQ8IVT2 679 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 ARMC10Q8N2F6 343 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 AMER2Q8N7J2 671 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 THAP3Q8WTV1 239 aaPredicted RBP11.02□□□□□ -0.64
USF1-203ENST00000368021 TMEM255BQ8WV15 326 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 RNF138Q8WVD3 245 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 CAPSLQ8WWF8 208 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 TMCO6Q96DC7 493 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 CCNL2Q96S94 520 aaPredicted RBP11.02□□□□□ -0.64
USF1-203ENST00000368021 DPH1Q9BZG8 443 aa11.02□□□□□ -0.64
USF1-203ENST00000368021 ZBTB20Q9HC78 741 aaPredicted RBP11.02□□□□□ -0.64
USF1-203ENST00000368021 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.02□□□□□ -0.64
USF1-203ENST00000368021 EFSO43281 561 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 ZNF354AO60765 605 aaPredicted RBP11.02□□□□□ -0.65
USF1-203ENST00000368021 HPP00738 406 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 FBXO45P0C2W1 286 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 TRAPPC2P0DI81 140 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 TRAPPC2BP0DI82 140 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 ENPP1P22413 925 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 CHMP24386 653 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 FPR3P25089 353 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 CD40LGP29965 261 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 GGT2P36268 569 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 CRISP1P54107 249 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 TPTEP56180 551 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 RPS18P62269 152 aaKnown RBP11.02□□□□□ -0.65
USF1-203ENST00000368021 S100A12P80511 92 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 LSM11P83369 360 aaKnown RBP eCLIP11.02□□□□□ -0.65
USF1-203ENST00000368021 TSPAN31Q12999 210 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 NDUFAF6Q330K2 333 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 ALG10BQ5I7T1 473 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 DESI1Q6ICB0 168 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 WDR88Q6ZMY6 472 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 C16orf47Q6ZP98 133 aaPredicted RBP11.02□□□□□ -0.65
USF1-203ENST00000368021 NRMQ8IXM6 262 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 ELMOD2Q8IZ81 293 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 GNPDA2Q8TDQ7 276 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 TMEM239Q8WW34 195 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 HGDQ93099 445 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 NEK6Q9HC98 313 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 C12orf4Q9NQ89 552 aa11.02□□□□□ -0.65
USF1-203ENST00000368021 LOC101059948A0A1B0GTJ6 334 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 ZAR1LA6NP61 321 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 KLF4O43474 513 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 OR2J2O76002 312 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 ANGPTL1O95841 491 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 PTTG1O95997 202 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 PRKCAP17252 672 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 PTGS2P35354 604 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 DLSTP36957 453 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 FBXW4P57775 412 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 CXADRP78310 365 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 CD47Q08722 323 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 PTGES3Q15185 160 aaKnown RBP11.01□□□□□ -0.65
USF1-203ENST00000368021 NTRK2Q16620 822 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 COL28A1Q2UY09 1125 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 WBP2NLQ6ICG8 309 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 CBLN3Q6UW01 205 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 LYPD8Q6UX82 237 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 LINC00114Q6XXX2 140 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 PRICKLE2Q7Z3G6 844 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 ZNF786Q8N393 782 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 GATSQ8NAP1 163 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 GRHL3Q8TE85 626 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 HDAC2Q92769 488 aaKnown RBP11.01□□□□□ -0.65
USF1-203ENST00000368021 RASL10BQ96S79 203 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 GPA33Q99795 319 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 RTN4RQ9BZR6 473 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 RPS6KB2Q9UBS0 482 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 TMEM5Q9Y2B1 443 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 ZFYVE26Q68DK2 2539 aa11.01□□□□□ -0.65
USF1-203ENST00000368021 KMT2BQ9UMN6 2715 aaPredicted RBP11.01□□□□□ -0.65
USF1-203ENST00000368021 ZSCAN5BA6NJL1 495 aa11□□□□□ -0.65
USF1-203ENST00000368021 HCRTR2O43614 444 aa11□□□□□ -0.65
USF1-203ENST00000368021 TP53P04637 393 aaPredicted RBP11□□□□□ -0.65
USF1-203ENST00000368021 LIFP15018 202 aa11□□□□□ -0.65
USF1-203ENST00000368021 WT1P19544 449 aaPredicted RBP11□□□□□ -0.65
USF1-203ENST00000368021 OTX2P32243 289 aa11□□□□□ -0.65
USF1-203ENST00000368021 CTBP2P56545 445 aa11□□□□□ -0.65
USF1-203ENST00000368021 IL5RAQ01344 420 aa11□□□□□ -0.65
USF1-203ENST00000368021 ZNF117Q03924 483 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms