RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 NAV3Q8IVL0 2385 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 BBIP1A8MTZ0 92 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 AIM2O14862 343 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 GCM2O75603 506 aaPredicted RBP13.06□□□□□ -0.32
SF3B5-201ENST00000367569 CD99P14209 185 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 UQCRBP14927 111 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 ETS2P15036 469 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 EDNRAP25101 427 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 APOBEC1P41238 236 aaKnown RBP13.06□□□□□ -0.32
SF3B5-201ENST00000367569 SLC1A3P43003 542 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 KCNJ5P48544 419 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 OR2B6P58173 313 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 FAM27E3Q08E93 113 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 POU4F3Q15319 338 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 PRAMEF8Q5VWM4 474 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 PRAMEF7Q5VXH5 474 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 ZNF474Q6S9Z5 364 aaPredicted RBP13.06□□□□□ -0.32
SF3B5-201ENST00000367569 FAM214BQ7L5A3 538 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 CPLX4Q7Z7G2 160 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 KRT73Q86Y46 540 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 ARMC8Q8IUR7 673 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 P3H2Q8IVL5 708 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 TUSC5Q8IXB3 177 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 ZNF440Q8IYI8 595 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 RNF217Q8TC41 542 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 FAM222BQ8WU58 562 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 C3orf49Q96BT1 292 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 LRRC46Q96FV0 321 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 GMPPAQ96IJ6 420 aaPredicted RBP13.06□□□□□ -0.32
SF3B5-201ENST00000367569 PIGMQ9H3S5 423 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 ZNF232Q9UNY5 417 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 PLEKHA6Q9Y2H5 1048 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 IFT52Q9Y366 437 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 SPIN1Q9Y657 262 aaPredicted RBP13.06□□□□□ -0.32
SF3B5-201ENST00000367569 GMEB1Q9Y692 573 aa13.06□□□□□ -0.32
SF3B5-201ENST00000367569 FLNAP21333 2647 aaKnown RBP13.05□□□□□ -0.32
SF3B5-201ENST00000367569 CGAP01215 116 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 IMPDH2P12268 514 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 TNFRSF1BP20333 461 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 PRKAR1BP31321 381 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 PCGF2P35227 344 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 GZMMP51124 257 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 PCBP3P57721 371 aaKnown RBP13.05□□□□□ -0.32
SF3B5-201ENST00000367569 RGS8P57771 180 aaPredicted RBP13.05□□□□□ -0.32
SF3B5-201ENST00000367569 COPZ1P61923 177 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 TSC22D1Q15714 1073 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 ANKRD34AQ69YU3 496 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 WBP2NLQ6ICG8 309 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 ZNF550Q7Z398 422 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 NET1Q7Z628 596 aaPredicted RBP13.05□□□□□ -0.32
SF3B5-201ENST00000367569 GPR32P1Q8NGA4 272 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 SLC25A43Q8WUT9 341 aaPredicted RBP13.05□□□□□ -0.32
SF3B5-201ENST00000367569 PMM1Q92871 262 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 TAMM41Q96BW9 452 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 ZC3HAV1LQ96H79 300 aaKnown RBP13.05□□□□□ -0.32
SF3B5-201ENST00000367569 KLHL4Q9C0H6 718 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 TIGARQ9NQ88 270 aa13.05□□□□□ -0.32
SF3B5-201ENST00000367569 PAQR5Q9NXK6 330 aaPredicted RBP13.05□□□□□ -0.32
SF3B5-201ENST00000367569 FOXD3Q9UJU5 478 aaPredicted RBP13.05□□□□□ -0.32
SF3B5-201ENST00000367569 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.32
SF3B5-201ENST00000367569 GMNCA6NCL1 334 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 A8MXE2 369 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 MSTNO14793 375 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 SNX3O60493 162 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 CRHP06850 196 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 POU2F1P14859 743 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 CXCR1P25024 350 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 NUDT2P50583 147 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 CRYBA2P53672 197 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 NCALDP61601 193 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 DAZAP2Q15038 168 aaPredicted RBP13.04□□□□□ -0.32
SF3B5-201ENST00000367569 OR7A5Q15622 319 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 VMACQ2NL98 169 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 ABLIM2Q6H8Q1 611 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 DHRS4L2Q6PKH6 230 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 TMPPEQ6ZT21 453 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 TGIF2LYQ8IUE0 185 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 RBM45Q8IUH3 476 aaKnown RBP13.04□□□□□ -0.32
SF3B5-201ENST00000367569 CCDC103Q8IW40 242 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 OR4D11Q8NGI4 311 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 OR6K3Q8NGY3 331 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 DDIT4LQ96D03 193 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 ZNF607Q96SK3 696 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 ECSITQ9BQ95 431 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 PSD2Q9BQI7 771 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 SPATA5L1Q9BVQ7 753 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 KLHL28Q9NXS3 571 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 RPS6KB2Q9UBS0 482 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 ING1Q9UK53 422 aaPredicted RBP13.04□□□□□ -0.32
SF3B5-201ENST00000367569 SLC13A4Q9UKG4 626 aa13.04□□□□□ -0.32
SF3B5-201ENST00000367569 A0A1B0GWA3 101 aa13.03□□□□□ -0.32
SF3B5-201ENST00000367569 TUBAL3A6NHL2 446 aa13.03□□□□□ -0.32
SF3B5-201ENST00000367569 M0QX08 132 aa13.03□□□□□ -0.32
SF3B5-201ENST00000367569 FAAHO00519 579 aa13.03□□□□□ -0.32
SF3B5-201ENST00000367569 CCDC22O60826 627 aa13.03□□□□□ -0.32
SF3B5-201ENST00000367569 SHOX2O60902 331 aaPredicted RBP13.03□□□□□ -0.32
SF3B5-201ENST00000367569 MFN2O95140 757 aa13.03□□□□□ -0.32
SF3B5-201ENST00000367569 IGHV3-9P01782 118 aa13.03□□□□□ -0.32
SF3B5-201ENST00000367569 EPXP11678 715 aa13.03□□□□□ -0.32
SF3B5-201ENST00000367569 CD247P20963 164 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms