RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MFSD8Q8NHS3 518 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 GMPR2Q9P2T1 348 aaKnown RBP10.74□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF175Q9Y473 711 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 KNTC1P50748 2209 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 SPAARA0A1B0GVQ0 90 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 ARHGAP33O14559 1287 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 UTS2O95399 124 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 GTF2F2P13984 249 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 NPR2P20594 1047 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 PSPHP78330 225 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 GFRALQ6UXV0 394 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF517Q6ZMY9 492 aaPredicted RBP10.74□□□□□ -0.69
SYNE1-204ENST00000367248 LINC00615Q96LM1 132 aaPredicted RBP10.74□□□□□ -0.69
SYNE1-204ENST00000367248 PRDM6Q9NQX0 595 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 PFDN2Q9UHV9 154 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 ASB1Q9Y576 335 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 A0A1B0GWA3 101 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 IDSB3KWA1 339 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 HSPB6O14558 160 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 SUSD5O60279 629 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 PIAS2O75928 621 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 NSA2O95478 260 aaKnown RBP10.74□□□□□ -0.69
SYNE1-204ENST00000367248 POGLUT1Q8NBL1 392 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 SLC2A12Q8TD20 617 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 IL1F10Q8WWZ1 152 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 SLC22A7Q9Y694 548 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 CISD3P0C7P0 127 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 HTR5AP47898 357 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 DUSP2Q05923 314 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 C17orf67Q0P5P2 114 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 ASB12Q8WXK4 309 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 POLE3Q9NRF9 147 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 LRFN1Q9P244 771 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 J3KTA2 159 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 GSTT2P0CG29 244 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 ANXA3P12429 323 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 PRKAR1BP31321 381 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 EMP3P54852 163 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 MELKQ14680 651 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 OLIG3Q7RTU3 272 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 TMEM163Q8TC26 289 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 MED18Q9BUE0 208 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 C19orf53Q9UNZ5 99 aaPredicted RBP10.74□□□□□ -0.69
SYNE1-204ENST00000367248 SLC17A4Q9Y2C5 497 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 OR51B4Q9Y5P0 310 aa10.74□□□□□ -0.69
SYNE1-204ENST00000367248 OR2W5A6NFC9 320 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 GABRR1P24046 479 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 ART1P52961 327 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 C9orf152Q5JTZ5 239 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 PLCXD3Q63HM9 321 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 SLC6A19Q695T7 634 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 FBXL6Q8N531 539 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 OR5M9Q8NGP3 310 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 OR2A1Q8NGT9 310 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 KLK8O60259 260 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 CD97P48960 835 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 NCS1P62166 190 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 EXT1Q16394 746 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 VASNQ6EMK4 673 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF322Q6U7Q0 402 aaPredicted RBP10.73□□□□□ -0.69
SYNE1-204ENST00000367248 ELMOD2Q8IZ81 293 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 OR13C2Q8NGS9 318 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 THAP6Q8TBB0 222 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 PCDHGA10Q9Y5H3 936 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 FAM183AA6NL82 134 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF44P15621 663 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 ATXN7L3Q14CW9 347 aaPredicted RBP10.73□□□□□ -0.69
SYNE1-204ENST00000367248 TMEM244Q5VVB8 128 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF417Q8TAU3 575 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 TMEM68Q96MH6 324 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 ABCD2Q9UBJ2 740 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 CHP2O43745 196 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 TMPRSS11DO60235 418 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 AMY2BP19961 511 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 UGT2B10P36537 528 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 PPIAP62937 165 aaKnown RBP10.73□□□□□ -0.69
SYNE1-204ENST00000367248 OR6Q1Q8NGQ2 317 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 STT3BQ8TCJ2 826 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 MRGPRX3Q96LB0 322 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 ABCG5Q9H222 651 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 A4GALTQ9NPC4 353 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 DUSP22Q9NRW4 184 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 SIDT1Q9NXL6 827 aaKnown RBP10.73□□□□□ -0.69
SYNE1-204ENST00000367248 PLA2G3Q9NZ20 509 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 MRPL15Q9P015 296 aaKnown RBP10.73□□□□□ -0.69
SYNE1-204ENST00000367248 KCNIP3Q9Y2W7 256 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 CORINQ9Y5Q5 1042 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 TMED7-TICAM2A0A0A6YYA0 188 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 SFTPBP07988 381 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 POLR2HP52434 150 aaKnown RBP10.73□□□□□ -0.69
SYNE1-204ENST00000367248 TRMT12Q53H54 448 aaKnown RBP10.73□□□□□ -0.69
SYNE1-204ENST00000367248 CMIPQ8IY22 773 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 ASCC1Q8N9N2 400 aaKnown RBP10.73□□□□□ -0.69
SYNE1-204ENST00000367248 IL17RDQ8NFM7 739 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 GOT1L1Q8NHS2 421 aaPredicted RBP10.73□□□□□ -0.69
SYNE1-204ENST00000367248 CPT1CQ8TCG5 803 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 CHST8Q9H2A9 424 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 TMEM38AQ9H6F2 299 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF355PQ9NSJ1 428 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 CNOT2Q9NZN8 540 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms