RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 NCLNQ969V3 563 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 EME1Q96AY2 570 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 CNRIP1Q96F85 164 aaPredicted RBP7.07□□□□□ -1.28
YBX3-204ENST00000366290 CHMP6Q96FZ7 201 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 MARK4Q96L34 752 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 CCDC28BQ9BUN5 200 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 PRSS22Q9GZN4 317 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 ZNF385DQ9H6B1 395 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 REEP4Q9H6H4 257 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 SPAG4Q9NPE6 437 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 TCF7L2Q9NQB0 619 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 PNO1Q9NRX1 252 aaKnown RBP7.07□□□□□ -1.28
YBX3-204ENST00000366290 TAS2R7Q9NYW3 318 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 ATP6V1HQ9UI12 483 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 WBP11Q9Y2W2 641 aaKnown RBP7.07□□□□□ -1.28
YBX3-204ENST00000366290 YARS2Q9Y2Z4 477 aaKnown RBP7.07□□□□□ -1.28
YBX3-204ENST00000366290 CLCA3PQ9Y6N3 262 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 EML6Q6ZMW3 1958 aa7.07□□□□□ -1.28
YBX3-204ENST00000366290 NCOA6Q14686 2063 aaPredicted RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 A0A087X0M5 115 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 TRBV5-7A0A0A0MS05 114 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 A0A0G2JND7 137 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 A0A1B0GX30 115 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 C17orf105B2RV13 164 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 C9JVG2 144 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 E9PBE3 544 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 SCAMP2O15127 329 aaKnown RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 PRKNO60260 465 aaPredicted RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 SHOX2O60902 331 aaPredicted RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 SLC25A12O75746 678 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 ZFAND5O76080 213 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 CLDN1O95832 211 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 F10P00742 488 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 SP1P08047 785 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 STSP08842 583 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 SLC35E2P0CK97 266 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 LAMP1P11279 417 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 CPMP14384 443 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 COX7A2P14406 83 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 PTGER1P34995 402 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 FRKP42685 505 aaPredicted RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 ASMTP46597 345 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 XKP51811 444 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 PLIN5Q00G26 463 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 MAD2L1Q13257 205 aaPredicted RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 HEPACAMQ14CZ8 416 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 EIF2S3LQ2VIR3 472 aaKnown RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 SLC25A25Q6KCM7 469 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 TMEM81Q6P7N7 255 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 IL20RBQ6UXL0 311 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 HSDL2Q6YN16 418 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 DEF8Q6ZN54 512 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 CAMKMTQ7Z624 323 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 TICAM1Q8IUC6 712 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 SIAH3Q8IW03 269 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 OR7A2PQ8NGA2 310 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 OR4K14Q8NGD5 310 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 OR9I1Q8NGQ6 314 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 NUBPLQ8TB37 319 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 DOK4Q8TEW6 326 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 ZNF721Q8TF20 911 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 CIDECQ96AQ7 238 aaPredicted RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 EXOSC8Q96B26 276 aaKnown RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 RBM18Q96H35 190 aaKnown RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 SENP5Q96HI0 755 aaPredicted RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 SIKE1Q9BRV8 207 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 PELOQ9BRX2 385 aaKnown RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 FAIM2Q9BWQ8 316 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 WDR41Q9HAD4 459 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 SLC35C2Q9NQQ7 365 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 SDR39U1Q9NRG7 319 aaPredicted RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 TAS2R10Q9NYW0 307 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 ERRFI1Q9UJM3 462 aaPredicted RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 ERVK-11Q9UQG0 969 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 EIF3LQ9Y262 564 aaKnown RBP7.06□□□□□ -1.28
YBX3-204ENST00000366290 CSMD2Q7Z408 3487 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 EXPH5Q8NEV8 1989 aa7.06□□□□□ -1.28
YBX3-204ENST00000366290 NINQ8N4C6 2090 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 TEX13CA0A0J9YWL9 993 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 GMNCA6NCL1 334 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 CGB1A6NKQ9 187 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 A8MUA0 341 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 MYO1GB0I1T2 1018 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 ADAM10O14672 748 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 UBDO15205 165 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 SCN2BO60939 215 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 OR2J2O76002 312 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 LDLRP01130 860 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 CLPSP04118 112 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 IFNA16P05015 189 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 ATP1B1P05026 303 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 CT62P0C5K7 136 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 TROVE2P10155 538 aaKnown RBP eCLIP7.05□□□□□ -1.28
YBX3-204ENST00000366290 EFNA1P20827 205 aaPredicted RBP7.05□□□□□ -1.28
YBX3-204ENST00000366290 PRPS1L1P21108 318 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 S1PR1P21453 382 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 GPX3P22352 226 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 PIK3R1P27986 724 aa7.05□□□□□ -1.28
YBX3-204ENST00000366290 FEN1P39748 380 aaKnown RBP7.05□□□□□ -1.28
YBX3-204ENST00000366290 SSR4P51571 173 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms