RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 PGAP1Q75T13 922 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 RELL2Q8NC24 303 aaPredicted RBP13.79□□□□□ -0.2
UBAP1-202ENST00000359544 ZNF740Q8NDX6 193 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 OR5M1Q8NGP8 315 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 C15orf40Q8WUR7 153 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 OR1F2PQ96R84 312 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 MYADMQ96S97 322 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 PHF7Q9BWX1 381 aaPredicted RBP13.79□□□□□ -0.2
UBAP1-202ENST00000359544 C1QTNF2Q9BXJ5 285 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 PIGMQ9H3S5 423 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 IL20RAQ9UHF4 553 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 ERVK-19Q9WJR5 959 aa13.79□□□□□ -0.2
UBAP1-202ENST00000359544 BNIP3LO60238 219 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 TMEM127O75204 238 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 UCHL1P09936 223 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 ART1P52961 327 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 H2BFSP57053 126 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 ACTC1P68032 377 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 ACTA1P68133 377 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 FAM209BQ5JX69 171 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 KHDRBS2Q5VWX1 349 aaKnown RBP13.78□□□□□ -0.2
UBAP1-202ENST00000359544 ZNF613Q6PF04 617 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 NKAIN4Q8IVV8 208 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 TRAM1L1Q8N609 369 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 OR9A1PQ8NGU1 263 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 SCAMP4Q969E2 229 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 KISS1RQ969F8 398 aaPredicted RBP13.78□□□□□ -0.2
UBAP1-202ENST00000359544 ZNF768Q9H5H4 540 aaKnown RBP13.78□□□□□ -0.2
UBAP1-202ENST00000359544 MED20Q9H944 212 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 KLHL28Q9NXS3 571 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 GPN3Q9UHW5 284 aaPredicted RBP13.78□□□□□ -0.2
UBAP1-202ENST00000359544 MTCL1Q9Y4B5 1905 aaKnown RBP13.78□□□□□ -0.2
UBAP1-202ENST00000359544 CDHR4A6H8M9 788 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 SIGLEC5O15389 551 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 OR5F1O95221 314 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 RHOP08100 348 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 CNR1P21554 472 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 FAUP35544 74 aaKnown RBP13.78□□□□□ -0.2
UBAP1-202ENST00000359544 SIGLEC14Q08ET2 396 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 FUT5Q11128 374 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 ZNF528Q3MIS6 628 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 MOB3CQ70IA8 216 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 OR2AK2Q8NG84 335 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 OR13C5Q8NGS8 318 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 HMGB4Q8WW32 186 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 CACYBPQ9HB71 228 aaKnown RBP13.78□□□□□ -0.2
UBAP1-202ENST00000359544 BARX1Q9HBU1 254 aaPredicted RBP13.78□□□□□ -0.2
UBAP1-202ENST00000359544 POLMQ9NP87 494 aaPredicted RBP13.78□□□□□ -0.2
UBAP1-202ENST00000359544 NRIP3Q9NQ35 241 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 KLK11Q9UBX7 282 aa13.78□□□□□ -0.2
UBAP1-202ENST00000359544 AK6Q9Y3D8 172 aaKnown RBP13.78□□□□□ -0.2
UBAP1-202ENST00000359544 NUP210Q8TEM1 1887 aaPredicted RBP13.77□□□□□ -0.2
UBAP1-202ENST00000359544 ACOT7O00154 380 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 GOSR2O14653 212 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 YKT6O15498 198 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 NTN1O95631 604 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 PDHA2P29803 388 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 PYCR1P32322 319 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 BSGP35613 385 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 CTSCP53634 463 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 OR12D2P58182 307 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 FGL2Q14314 439 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 MELKQ14680 651 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 SWI5Q1ZZU3 235 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 ELP2Q6IA86 826 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 FAM199XQ6PEV8 388 aaPredicted RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 RPTNQ6XPR3 784 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 SPAG16Q8N0X2 631 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 RASGEF1AQ8N9B8 481 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 OR52B4Q8NGK2 314 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 ZFPM2Q8WW38 1151 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 GCDHQ92947 438 aaPredicted RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 PDCD10Q9BUL8 212 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 CPEB1Q9BZB8 566 aaKnown RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 ZDHHC6Q9H6R6 413 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 ZNF334Q9HCZ1 680 aaPredicted RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 ST6GALNAC2Q9UJ37 374 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 ANAPC1Q9H1A4 1944 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 A0A0D9SG52 128 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 FAM86C2PA6NEL3 165 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 RTCAO00442 366 aaKnown RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 SBK2P0C263 348 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 PBLDP30039 288 aaPredicted RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 TRHRP34981 398 aaPredicted RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 POLR2LP62875 67 aaKnown RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 ZNF85Q03923 595 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 RBMS2Q15434 407 aaKnown RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 LRRC73Q5JTD7 316 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 OR7E24Q6IFN5 339 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 TSSK4Q6SA08 328 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 SYT9Q86SS6 491 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 ARMC10Q8N2F6 343 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 C12orf45Q8N5I9 185 aaPredicted RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 CXorf40AQ8TE69 158 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 VOPP1Q96AW1 172 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 S100A16Q96FQ6 103 aaKnown RBP13.77□□□□□ -0.21
UBAP1-202ENST00000359544 MBD2Q9UBB5 411 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 DPP7Q9UHL4 492 aa13.77□□□□□ -0.21
UBAP1-202ENST00000359544 A0A1W2PPK0 400 aa13.76□□□□□ -0.21
UBAP1-202ENST00000359544 ZNF879B4DU55 563 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms