RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 DEFB133Q30KQ1 61 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 SLC35D2Q76EJ3 337 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 PRICKLE2Q7Z3G6 844 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 LGALS14Q8TCE9 139 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 TOX2Q96NM4 488 aa12.77□□□□□ -0.37
VCP-201ENST00000358901 A0A1B0GWA3 101 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 TUBG1P23258 451 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 HTR1FP30939 366 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 FOXK2Q01167 660 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 WBP2NLQ6ICG8 309 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 PAQR6Q6TCH4 344 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 DYNC2LI1Q8TCX1 351 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 TMEM106AQ96A25 262 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 NECTIN4Q96NY8 510 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 MYADMQ96S97 322 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 NMNAT3Q96T66 252 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 ST6GALNAC5Q9BVH7 336 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 C8orf33Q9H7E9 229 aaPredicted RBP12.76□□□□□ -0.37
VCP-201ENST00000358901 NOX1Q9Y5S8 564 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 TMEM269A0A1B0GVZ9 245 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 GAPDHSO14556 408 aaPredicted RBP12.76□□□□□ -0.37
VCP-201ENST00000358901 ZDHHC11BP0C7U3 371 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 JMJD7P0C870 316 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 FXYD4P59646 89 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 SNRPGP62308 76 aaKnown RBP12.76□□□□□ -0.37
VCP-201ENST00000358901 NFATC4Q14934 902 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 TMEM244Q5VVB8 128 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 HACD4Q5VWC8 232 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 CYHR1Q6ZMK1 362 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 GDF7Q7Z4P5 450 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 DUSP19Q8WTR2 217 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 FAM3CQ92520 227 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 DDIT4LQ96D03 193 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 ALG12Q9BV10 488 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 C1GALT1Q9NS00 363 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 RPH3AQ9Y2J0 694 aaPredicted RBP12.76□□□□□ -0.37
VCP-201ENST00000358901 RHBDD3Q9Y3P4 386 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 A0A087WUU8 490 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 TRDV1A0A1B0GX56 115 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 A6NL46 340 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 YY2O15391 372 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 GPX5O75715 221 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 OR2T7P0C7T2 308 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 FPR3P25089 353 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 RAP2BP61225 183 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 TDGQ13569 410 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 USF2Q15853 346 aaPredicted RBP12.76□□□□□ -0.37
VCP-201ENST00000358901 SLC22A6Q4U2R8 563 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 ZNF385BQ569K4 471 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 GPR139Q6DWJ6 353 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 SLC48A1Q6P1K1 146 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 GPR137CQ8N3F9 429 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 FAM109AQ8N4B1 249 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 OR51T1Q8NGJ9 327 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 OR2T27Q8NH04 317 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 NINJ1Q92982 152 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 OR5B2Q96R09 309 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 NAA11Q9BSU3 229 aaPredicted RBP12.76□□□□□ -0.37
VCP-201ENST00000358901 ZNF436Q9C0F3 470 aaPredicted RBP12.76□□□□□ -0.37
VCP-201ENST00000358901 HHATLQ9HCP6 504 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 CA14Q9ULX7 337 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 POLHQ9Y253 713 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 SPAG17Q6Q759 2223 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 HTR3BO95264 441 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 CAMLGP49069 296 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 MTNR1BP49286 362 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 AQP6Q13520 282 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 BEX5Q5H9J7 111 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 VASNQ6EMK4 673 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 DPY19L4Q7Z388 723 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 ABHD12BQ7Z5M8 362 aaPredicted RBP12.76□□□□□ -0.37
VCP-201ENST00000358901 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 NKAIN4Q8IVV8 208 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 ZNF709Q8N972 641 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 SLC7A6Q92536 515 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 ZBTB8AQ96BR9 441 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 CRB3Q9BUF7 120 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 KCNS2Q9ULS6 477 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 BTAF1O14981 1849 aa12.76□□□□□ -0.37
VCP-201ENST00000358901 SRPX2O60687 465 aaPredicted RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 UBL3O95164 117 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 SERPINA5P05154 406 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 DRD1P21728 446 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 PRKAR1BP31321 381 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 SLC19A1P41440 591 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 OR1D4P47884 311 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 MAT1AQ00266 395 aaKnown RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 ARL6IP1Q15041 203 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 ACSM5Q6NUN0 579 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 ARL11Q969Q4 196 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 TOE1Q96GM8 510 aaKnown RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 FYTTD1Q96QD9 318 aaKnown RBP12.75□□□□□ -0.37
VCP-201ENST00000358901 OR14A2Q96R54 314 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 HCAR1Q9BXC0 346 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 ICKQ9UPZ9 632 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 A6NIZ1 184 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 SYNGR4O95473 234 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 TCRBP04435 133 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 GAAP10253 952 aa12.75□□□□□ -0.37
VCP-201ENST00000358901 CHRNB1P11230 501 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms