RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 IER3IP1Q9Y5U9 82 aa7.9□□□□□ -1.14
RFX3-202ENST00000358730 NPFFR2Q9Y5X5 522 aa7.9□□□□□ -1.14
RFX3-202ENST00000358730 SPTBP11277 2137 aa7.9□□□□□ -1.14
RFX3-202ENST00000358730 NOTOA8MTQ0 251 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 CDC123O75794 336 aaPredicted RBP7.9□□□□□ -1.15
RFX3-202ENST00000358730 ARL6IP5O75915 188 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 UBL3O95164 117 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 NDUFB2O95178 105 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 CTSBP07858 339 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 AKT2P31751 481 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 RPL4P36578 427 aaKnown RBP7.9□□□□□ -1.15
RFX3-202ENST00000358730 GBX2P52951 348 aaPredicted RBP7.9□□□□□ -1.15
RFX3-202ENST00000358730 DGCR2P98153 550 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 GAS6Q14393 721 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 NDUFAF6Q330K2 333 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 GXYLT1Q4G148 440 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 MANEAQ5SRI9 462 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 FAM205BPQ63HN1 556 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 Q6ZSR6 202 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 ESPNLQ6ZVH7 1005 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 UBE2Q1Q7Z7E8 422 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 OOSP2Q86WS3 158 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 GRAMD2AQ8IUY3 354 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 SLC35F2Q8IXU6 374 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 POMGNT2Q8NAT1 580 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 SLC37A2Q8TED4 501 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 SNAPC3Q92966 411 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 YIPF5Q969M3 257 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 OR14A2Q96R54 314 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 CDCA3Q99618 268 aaPredicted RBP7.9□□□□□ -1.15
RFX3-202ENST00000358730 TCEAL2Q9H3H9 227 aaPredicted RBP7.9□□□□□ -1.15
RFX3-202ENST00000358730 CCDC86Q9H6F5 360 aaKnown RBP7.9□□□□□ -1.15
RFX3-202ENST00000358730 EVA1AQ9H8M9 152 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 MKKSQ9NPJ1 570 aaPredicted RBP7.9□□□□□ -1.15
RFX3-202ENST00000358730 HEATR5AQ86XA9 2040 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 MPDZO75970 2070 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 USP34Q70CQ2 3546 aa7.9□□□□□ -1.15
RFX3-202ENST00000358730 TRAV1-2A0A0B4J238 106 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 HRKO00198 91 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 SERPINI2O75830 405 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 IFI6P09912 130 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 OR2T7P0C7T2 308 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 EPXP11678 715 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 TYRP1P17643 537 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 EDNRAP25101 427 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 STOMP27105 288 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 SLC36A2Q495M3 483 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 ZNF542PQ5EBM4 170 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 HACD4Q5VWC8 232 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 LAMTOR1Q6IAA8 161 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 ULK3Q6PHR2 472 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 SLC43A2Q8N370 569 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 LRRC17Q8N6Y2 441 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 LSMEM1Q8N8F7 131 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 TEX19Q8NA77 164 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 OR6K6Q8NGW6 343 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 OR2T27Q8NH04 317 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 ZNF671Q8TAW3 534 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 HOXB13Q92826 284 aaPredicted RBP7.89□□□□□ -1.15
RFX3-202ENST00000358730 SGTBQ96EQ0 304 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 HYLS1Q96M11 299 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 LMF2Q9BU23 707 aaKnown RBP7.89□□□□□ -1.15
RFX3-202ENST00000358730 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.89□□□□□ -1.15
RFX3-202ENST00000358730 LMAN2LQ9H0V9 348 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 HCN3Q9P1Z3 774 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 SERTAD3Q9UJW9 196 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 ZNF222Q9UK12 451 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 DTX4Q9Y2E6 619 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 TDRD6O60522 2096 aaKnown RBP7.89□□□□□ -1.15
RFX3-202ENST00000358730 COL4A2P08572 1712 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 TRBV2A0A0J9YWF9 115 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 C7orf66A4D0T2 115 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 FAM221BA6H8Z2 402 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 FABP7O15540 132 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 TSC22D2O75157 780 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 CELA2BP08218 269 aaPredicted RBP7.89□□□□□ -1.15
RFX3-202ENST00000358730 SDHBP21912 280 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 GIFP27352 417 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 TPMTP51580 245 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 UBE2IP63279 158 aaKnown RBP7.89□□□□□ -1.15
RFX3-202ENST00000358730 SIRPAP78324 504 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 ZNF550Q7Z398 422 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 SIAH3Q8IW03 269 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 SYS1Q8N2H4 156 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 C7orf57Q8NEG2 295 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 OR13H1Q8NG92 308 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 LGALS14Q8TCE9 139 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 RIT1Q92963 219 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 PDCD1LG2Q9BQ51 273 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 GSDMCQ9BYG8 508 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 FAM60AQ9NP50 221 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.89□□□□□ -1.15
RFX3-202ENST00000358730 STMN3Q9NZ72 180 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 ABRACLQ9P1F3 81 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 AK6Q9Y3D8 172 aaKnown RBP7.89□□□□□ -1.15
RFX3-202ENST00000358730 NUBP2Q9Y5Y2 271 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 TEX13CA0A0J9YWL9 993 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 EPOPA6NHQ4 379 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 OGG1O15527 345 aa7.89□□□□□ -1.15
RFX3-202ENST00000358730 SELENOFO60613 162 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms