RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 STMN2Q93045 179 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 DNAJA3Q96EY1 480 aa13.73□□□□□ -0.21
TPM1-206ENST00000358278 ZC3H12DA2A288 527 aaKnown RBP13.72□□□□□ -0.21
TPM1-206ENST00000358278 GNGT2O14610 69 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 TNFSF11O14788 317 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 TIPRLO75663 272 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 LYPD3O95274 346 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 BCL2A1Q16548 175 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 PDSS1Q5T2R2 415 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 OR2T5Q6IEZ7 315 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 ZFP1Q6P2D0 407 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 FGD2Q7Z6J4 655 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 GGNQ86UU5 652 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 P3H2Q8IVL5 708 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 PAPD5Q8NDF8 572 aaKnown RBP13.72□□□□□ -0.21
TPM1-206ENST00000358278 PIK3C3Q8NEB9 887 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 OR5M9Q8NGP3 310 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 OR2T29Q8NH02 315 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 OR52J3Q8NH60 311 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 DUS3LQ96G46 650 aaKnown RBP13.72□□□□□ -0.21
TPM1-206ENST00000358278 ARL5BQ96KC2 179 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 EPYCQ99645 322 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 PRSS27Q9BQR3 290 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 TMEM43Q9BTV4 400 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 ANKRD19PQ9H560 264 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 MAN2C1Q9NTJ4 1040 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 ALKBH4Q9NXW9 302 aa13.72□□□□□ -0.21
TPM1-206ENST00000358278 MYO7BQ6PIF6 2116 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 A0A1W2PNR3 127 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 A0A1W2PRQ8 180 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 H0YC42 278 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 KPNA4O00629 521 aaPredicted RBP13.71□□□□□ -0.21
TPM1-206ENST00000358278 SLC19A2O60779 497 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 AHSA1O95433 338 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 CPN1P15169 458 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 FUT4P22083 530 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 RBM34P42696 430 aaKnown RBP13.71□□□□□ -0.21
TPM1-206ENST00000358278 EIF1AXP47813 144 aaKnown RBP13.71□□□□□ -0.21
TPM1-206ENST00000358278 CLK1P49759 484 aaKnown RBP13.71□□□□□ -0.21
TPM1-206ENST00000358278 SUCLG1P53597 346 aaKnown RBP13.71□□□□□ -0.21
TPM1-206ENST00000358278 TPD52P55327 224 aaPredicted RBP13.71□□□□□ -0.21
TPM1-206ENST00000358278 RPS3AP61247 264 aaKnown RBP13.71□□□□□ -0.21
TPM1-206ENST00000358278 DGCR6Q14129 220 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 C1orf140Q5VVS0 124 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 HBMQ6B0K9 141 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 C5orf46Q6UWT4 87 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 LINC00114Q6XXX2 140 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 ZNF730Q6ZMV8 503 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 CHMP1BQ7LBR1 199 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 RRM2BQ7LG56 351 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 CD163Q86VB7 1156 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 CHERPQ8IWX8 916 aaKnown RBP13.71□□□□□ -0.21
TPM1-206ENST00000358278 STK35Q8TDR2 534 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 TMEM239Q8WW34 195 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 WDYHV1Q96HA8 205 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 DHRS1Q96LJ7 313 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 HS6ST2Q96MM7 605 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 PRDM14Q9GZV8 571 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 REEP1Q9H902 201 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 PNPLA3Q9NST1 481 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 ARMC1Q9NVT9 282 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 HDGFL3Q9Y3E1 203 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 PCNX1Q96RV3 2341 aa13.71□□□□□ -0.21
TPM1-206ENST00000358278 IGKV1D-42A0A075B6H8 117 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 A0A0J9YW62 118 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 PRRG2O14669 202 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 HNRNPRO43390 633 aaKnown RBP13.7□□□□□ -0.22
TPM1-206ENST00000358278 DEAF1O75398 565 aaPredicted RBP13.7□□□□□ -0.22
TPM1-206ENST00000358278 KRT36O76013 467 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 FCGR1AP12314 374 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 RPS5P46782 204 aaKnown RBP13.7□□□□□ -0.22
TPM1-206ENST00000358278 EGR4Q05215 589 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 C19orf57Q0VDD7 668 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 MYBPHQ13203 477 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 SGCBQ16585 318 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 PPP4R4Q6NUP7 873 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 OR2V1Q8NHB1 315 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 FAM57AQ8TBR7 257 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 SLC7A13Q8TCU3 470 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 ACOT11Q8WXI4 607 aaPredicted RBP13.7□□□□□ -0.22
TPM1-206ENST00000358278 ZNF426Q9BUY5 554 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 KLHL4Q9C0H6 718 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 MED31Q9Y3C7 131 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 SAMHD1Q9Y3Z3 626 aaKnown RBP13.7□□□□□ -0.22
TPM1-206ENST00000358278 U3KQV3 271 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 RELNP78509 3460 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 HIVEP3Q5T1R4 2406 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 DIDO1Q9BTC0 2240 aaKnown RBP13.7□□□□□ -0.22
TPM1-206ENST00000358278 TRAV36DV7A0A075B6V5 113 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 FIGNL2A6NMB9 653 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 H0YHG0 523 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 SULT2B1O00204 365 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 TNFRSF11BO00300 401 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 FASP25445 335 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 IDUAP35475 653 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 DIO1P49895 249 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 UGT2B15P54855 530 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 CLDN15P56746 228 aa13.7□□□□□ -0.22
TPM1-206ENST00000358278 CSNK2A1P68400 391 aaPredicted RBP13.7□□□□□ -0.22
TPM1-206ENST00000358278 CTU2Q2VPK5 515 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms