RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 RBMXL1Q96E39 390 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 SLC25A18Q9H1K4 315 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 C1orf198Q9H425 327 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 VSX1Q9NZR4 365 aaPredicted RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 USP36Q9P275 1121 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 PRAMEF27A3QJZ7 478 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 BTBD17A6NE02 478 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 LRRC30A6NM36 301 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ZNF891A8MT65 544 aaPredicted RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 F6UZH7 168 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 H3BNC9 293 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 GFRA2O00451 464 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ZNF264O43296 627 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TGM6O95932 706 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ARSAP15289 507 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 GNB3P16520 340 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 PRKAR1BP31321 381 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 POU3F1Q03052 451 aaPredicted RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 PRAMEF9Q5VWM5 478 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SKA3Q8IX90 412 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 C19orf47Q8N9M1 422 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 CYB561A3Q8NBI2 242 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 GPR26Q8NDV2 337 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TMEM185AQ8NFB2 350 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 BBS1Q8NFJ9 593 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ABHD11Q8NFV4 315 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 EPHX3Q9H6B9 360 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ELOVL3Q9HB03 270 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 MMACHCQ9Y4U1 282 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 LRIT2A6NDA9 550 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 K7EQM0 130 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 BCAT2O15382 392 aaPredicted RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 SUSD5O60279 629 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ZNF254O75437 659 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 CA3P07451 260 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TFPTP0C1Z6 253 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SELEP16581 610 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 CD53P19397 219 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 GPX3P22352 226 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 STT3AP46977 705 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 RPS18P62269 152 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 CXADRP78310 365 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ZXDBP98169 803 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TBCEQ15813 527 aaPredicted RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 SLC22A6Q4U2R8 563 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 AADACL3Q5VUY0 350 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TMEM71Q6P5X7 295 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 NPSR1Q6W5P4 371 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 FAM57BQ71RH2 274 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 RBMXL3Q8N7X1 1067 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 OR51L1Q8NGJ5 315 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 GMLQ99445 158 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 OPA3Q9H6K4 179 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 AGPAT4Q9NRZ5 378 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 DECR2Q9NUI1 292 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TAAR2Q9P1P5 351 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 C5AR2Q9P296 337 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SLC23A2Q9UGH3 650 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 CD300AQ9UGN4 299 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TRAPPC2LQ9UL33 140 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 NOSIPQ9Y314 301 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 PLEKHM1Q9Y4G2 1056 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 LTN1O94822 1766 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 GABRR3A8MPY1 467 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 H3BMQ9 156 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 LDB3O75112 727 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SCRG1O75711 98 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 FKBP2P26885 142 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 EIF2DP41214 584 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 RAP2BP61225 183 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 MC2RQ01718 297 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 TSPAN31Q12999 210 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 PAN3Q58A45 887 aaKnown RBP6.04□□□□□ -1.44
UPF2-201ENST00000356352 ZNF691Q5VV52 312 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 STEAP3Q658P3 488 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 VASNQ6EMK4 673 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 FBXW12Q6X9E4 464 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SIAH1Q8IUQ4 282 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 KLHDC8BQ8IXV7 354 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ADOQ96SZ5 270 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SLC30A3Q99726 388 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 PAAF1Q9BRP4 392 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ACPTQ9BZG2 426 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 ULBP3Q9BZM4 244 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SLAMF7Q9NQ25 335 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 SEMA4GQ9NTN9 838 aa6.04□□□□□ -1.44
UPF2-201ENST00000356352 PIK3C2AO00443 1686 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 TRAV36DV7A0A075B6V5 113 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 OR52A4PA6NMU1 304 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 RRP8O43159 456 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 TNFRSF1BP20333 461 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 CRHBPP24387 322 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 PRDX3P30048 256 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 SNCAP37840 140 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 ETV4P43268 484 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 DCDP81605 110 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 CAMK2BQ13554 666 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 RBMS2Q15434 407 aaKnown RBP6.03□□□□□ -1.44
UPF2-201ENST00000356352 RPE65Q16518 533 aa6.03□□□□□ -1.44
UPF2-201ENST00000356352 PAGE3Q5JUK9 113 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms