RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 KDM4DQ6B0I6 523 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 FAM111BQ6SJ93 734 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 NCCRP1Q6ZVX7 275 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SZRD1Q7Z422 152 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 VTCN1Q7Z7D3 282 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 TMEM200AQ86VY9 491 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 GRAMD2AQ8IUY3 354 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 PEX5LQ8IYB4 626 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 CLEC4FQ8N1N0 589 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF619Q8N2I2 560 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 DHRSXQ8N5I4 330 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 COX18Q8N8Q8 333 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SETD9Q8NE22 299 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 PLPP5Q8NEB5 264 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 PHF10Q8WUB8 498 aaKnown RBP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 XAGE5Q8WWM1 108 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 NINJ1Q92982 152 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 TPD52L3Q96J77 140 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 MAGED4Q96JG8 741 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 PRRC1Q96M27 445 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 COL21A1Q96P44 957 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 LMF1Q96S06 567 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SLC29A1Q99808 456 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 ARHGDIGQ99819 225 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 GABARAPL3Q9BY60 117 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 HOXD1Q9GZZ0 328 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SLC38A1Q9H2H9 487 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 ZNF304Q9HCX3 659 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 Q9N2J8 555 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 HCN3Q9P1Z3 774 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 DHCR7Q9UBM7 475 aaKnown RBP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 TRPC4Q9UBN4 977 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SCOCQ9UIL1 159 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 MRTO4Q9UKD2 239 aaKnown RBP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SLC13A4Q9UKG4 626 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 ABCG2Q9UNQ0 655 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 MEMO1Q9Y316 297 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SAMHD1Q9Y3Z3 626 aaKnown RBP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 TESMINQ9Y4I5 508 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 LYVE1Q9Y5Y7 322 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 V9GYQ6 96 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 NSD1Q96L73 2696 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-201ENST00000355766 NUP210LQ5VU65 1888 aa6.34□□□□□ -1.39
VPS13A-201ENST00000355766 SPTBP11277 2137 aa6.34□□□□□ -1.4
VPS13A-201ENST00000355766 A0A1W2PQ72 361 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 TRIM64A6NGJ6 449 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 TNFRSF11BO00300 401 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 FAAHO00519 579 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 DLGAP1O14490 977 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 TO15178 435 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 KLF4O43474 513 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 MRPS14O60783 128 aaKnown RBP6.33□□□□□ -1.4
VPS13A-201ENST00000355766 LDB3O75112 727 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 UGT2B11O75310 529 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 UGT2B17O75795 530 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 H6PDO95479 791 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 ADAP00813 363 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 IGKV3-11P04433 115 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 NGFRP08138 427 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 C8orf89P0DMQ9 161 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 S1PR1P21453 382 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 IGFBP5P24593 272 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 AQP1P29972 269 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 IFNGR2P38484 337 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 TUBA4AP68366 448 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 POU6F2P78424 691 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-201ENST00000355766 ADARB1P78563 741 aaKnown RBP6.33□□□□□ -1.4
VPS13A-201ENST00000355766 RHAGQ02094 409 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF155Q12901 538 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-201ENST00000355766 LTB4RQ15722 352 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 GPAT3Q53EU6 434 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 DCST2Q5T1A1 773 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 TYW3Q6IPR3 259 aaKnown RBP6.33□□□□□ -1.4
VPS13A-201ENST00000355766 KRT80Q6KB66 452 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 KIRREL2Q6UWL6 708 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 UGT2A3Q6UWM9 527 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 FRRS1Q6ZNA5 592 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 Q6ZPB1 254 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-201ENST00000355766 BIVMQ86UB2 503 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 SLC43A2Q8N370 569 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 MORN4Q8NDC4 146 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF555Q8NEP9 628 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 GPR32P1Q8NGA4 272 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 OR11G2Q8NGC1 345 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 OR5D16Q8NGK9 328 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 OR4C15Q8NGM1 316 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 OR8K3Q8NH51 312 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 SPATA3Q8NHX4 192 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 FAM110BQ8TC76 370 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 NRGNQ92686 78 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 KAT2AQ92830 837 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 RAB8BQ92930 207 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 UCN3Q969E3 161 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 SDF2Q99470 211 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 PITX2Q99697 317 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 ALOXE3Q9BYJ1 711 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 SPRTNQ9H040 489 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-201ENST00000355766 KRCC1Q9NPI7 259 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-201ENST00000355766 SLC22A11Q9NSA0 550 aa6.33□□□□□ -1.4
VPS13A-201ENST00000355766 TUBA8Q9NY65 449 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms