RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 CHP2O43745 196 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 DIRAS1O95057 198 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 MAP2K6P52564 334 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 CARD18P57730 90 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 MYBPHQ13203 477 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 SGCBQ16585 318 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 SWT1Q5T5J6 900 aaKnown RBP19.88■□□□□ 0.77
SHMT1-203ENST00000354098 LINC00114Q6XXX2 140 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 SEM1Q6ZVN7 128 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 CHMP1BQ7LBR1 199 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 MARVELD2Q8N4S9 558 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 DDIT4LQ96D03 193 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 PRRC1Q96M27 445 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 PRSS27Q9BQR3 290 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 SRXN1Q9BYN0 137 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 MEMO1Q9Y316 297 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 A8MVM7 634 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 OR5F1O95221 314 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 FKBP2P26885 142 aaKnown RBP19.87■□□□□ 0.77
SHMT1-203ENST00000354098 RPS3AP61247 264 aaKnown RBP19.87■□□□□ 0.77
SHMT1-203ENST00000354098 ZSCAN26Q16670 478 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 NKAIN4Q8IVV8 208 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 ZNF300Q96RE9 604 aaPredicted RBP19.87■□□□□ 0.77
SHMT1-203ENST00000354098 TRIM15Q9C019 465 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 POLR2J2Q9GZM3 115 aaKnown RBP19.87■□□□□ 0.77
SHMT1-203ENST00000354098 POLR2J3Q9H1A7 115 aaKnown RBP19.87■□□□□ 0.77
SHMT1-203ENST00000354098 KIAA1549Q9HCM3 1950 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 AQP12BA6NM10 295 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 E9PLN8 166 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 NPIPB7O75200 414 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 PRSS23O95084 383 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 TGM6O95932 706 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 IMPDH2P12268 514 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 PTGER4P35408 488 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 CLK1P49759 484 aaKnown RBP19.87■□□□□ 0.77
SHMT1-203ENST00000354098 DIO1P49895 249 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 PON3Q15166 354 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 B3GNT6Q6ZMB0 384 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 TMPPEQ6ZT21 453 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 AQP12AQ8IXF9 295 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 KTI12Q96EK9 354 aaPredicted RBP19.87■□□□□ 0.77
SHMT1-203ENST00000354098 DMRTA2Q96SC8 542 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 VKORC1Q9BQB6 163 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 TTYH2Q9BSA4 534 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 IL1RAPQ9NPH3 570 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 CLCF1Q9UBD9 225 aa19.87■□□□□ 0.77
SHMT1-203ENST00000354098 MT-ND1P03886 318 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 HOXD4P09016 255 aaPredicted RBP19.86■□□□□ 0.77
SHMT1-203ENST00000354098 KLK2P20151 261 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 PMPCAQ10713 525 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 PDSS1Q5T2R2 415 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 C1orf140Q5VVS0 124 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 NSUN5P2Q63ZY6 315 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 PPP4R4Q6NUP7 873 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 SPATA24Q86W54 205 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 FNDC9Q8TBE3 224 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 POTEKPQ9BYX7 375 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 CALHM2Q9HA72 323 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 HDGFL3Q9Y3E1 203 aa19.86■□□□□ 0.77
SHMT1-203ENST00000354098 A0A1B0GUH1 482 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 SULT2B1O00204 365 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 TOXO94900 526 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 FABP3P05413 133 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 GLI4P10075 376 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 C4orf17Q53FE4 359 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 C1orf146Q5VVC0 180 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 ZDHHC21Q8IVQ6 265 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 ADGRG5Q8IZF4 528 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 STK35Q8TDR2 534 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 TMEM255BQ8WV15 326 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 CANT1Q8WVQ1 401 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 FNDC11Q9BVV2 318 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 MAN2C1Q9NTJ4 1040 aa19.85■□□□□ 0.77
SHMT1-203ENST00000354098 FAM32AQ9Y421 112 aaKnown RBP19.85■□□□□ 0.77
SHMT1-203ENST00000354098 UBR5O95071 2799 aaPredicted RBP19.85■□□□□ 0.77
SHMT1-203ENST00000354098 CD8B2A6NJW9 211 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 RHCEP18577 417 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 RPS5P46782 204 aaKnown RBP19.84■□□□□ 0.77
SHMT1-203ENST00000354098 NUP107P57740 925 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 RAC3P60763 192 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 ST3GAL3Q11203 375 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 SF3B4Q15427 424 aaKnown RBP eCLIP19.84■□□□□ 0.77
SHMT1-203ENST00000354098 OFCC1Q8IZS5 231 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 C9orf106Q8NAJ2 232 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 ROBO4Q8WZ75 1007 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 MPP4Q96JB8 637 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 UCN2Q96RP3 112 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 ZNF426Q9BUY5 554 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 PTDSS2Q9BVG9 487 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 NMNAT1Q9HAN9 279 aaPredicted RBP19.84■□□□□ 0.77
SHMT1-203ENST00000354098 PAQR5Q9NXK6 330 aaPredicted RBP19.84■□□□□ 0.77
SHMT1-203ENST00000354098 ERRFI1Q9UJM3 462 aaPredicted RBP19.84■□□□□ 0.77
SHMT1-203ENST00000354098 IGHV3-15A0A0B4J1V0 119 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 TCRBV3S1A0A5B6 114 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 SLC22A20A6NK97 555 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 AQP8O94778 261 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 PMS2P2O95744 297 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 THRBP10828 461 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 ENPP1P22413 925 aa19.84■□□□□ 0.77
SHMT1-203ENST00000354098 IDUAP35475 653 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms