RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 SERINC4A6NH21 518 aa19.99■□□□□ 0.79
SHMT1-202ENST00000352886 PSMD4P55036 377 aaKnown RBP19.99■□□□□ 0.79
SHMT1-202ENST00000352886 ZSWIM7Q19AV6 140 aa19.99■□□□□ 0.79
SHMT1-202ENST00000352886 TRILQ7L0X0 811 aa19.99■□□□□ 0.79
SHMT1-202ENST00000352886 PXKQ7Z7A4 578 aa19.99■□□□□ 0.79
SHMT1-202ENST00000352886 CMIPQ8IY22 773 aa19.99■□□□□ 0.79
SHMT1-202ENST00000352886 SAMD12Q8N8I0 201 aa19.99■□□□□ 0.79
SHMT1-202ENST00000352886 GHSRQ92847 366 aa19.99■□□□□ 0.79
SHMT1-202ENST00000352886 KCTD12Q96CX2 325 aaKnown RBP19.99■□□□□ 0.79
SHMT1-202ENST00000352886 CYSLTR2Q9NS75 346 aa19.99■□□□□ 0.79
SHMT1-202ENST00000352886 NLKQ9UBE8 527 aa19.99■□□□□ 0.79
SHMT1-202ENST00000352886 FAM240BA0A1B0GVZ2 78 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 A0A1W2PRG6 482 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 BLACEA4D250 179 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 EFCAB7A8K855 629 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 CENPXA8MT69 81 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 PRKNO60260 465 aaPredicted RBP19.98■□□□□ 0.79
SHMT1-202ENST00000352886 EIF4EP06730 217 aaKnown RBP19.98■□□□□ 0.79
SHMT1-202ENST00000352886 PROS1P07225 676 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 RPL4P36578 427 aaKnown RBP19.98■□□□□ 0.79
SHMT1-202ENST00000352886 FUT7Q11130 342 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 GXYLT1Q4G148 440 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 ACSM3Q53FZ2 586 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 TPRA1Q86W33 373 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 DTX3Q8N9I9 347 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 ST6GALNAC2Q9UJ37 374 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 TMEM184BQ9Y519 407 aaPredicted RBP19.98■□□□□ 0.79
SHMT1-202ENST00000352886 NOX1Q9Y5S8 564 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 NAA10P41227 235 aaPredicted RBP19.98■□□□□ 0.79
SHMT1-202ENST00000352886 NRG3P56975 720 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 SF3A2Q15428 464 aaKnown RBP19.98■□□□□ 0.79
SHMT1-202ENST00000352886 TATDN3Q17R31 274 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 ZNF57Q68EA5 555 aaPredicted RBP19.98■□□□□ 0.79
SHMT1-202ENST00000352886 GHDCQ8N2G8 530 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 DUSP18Q8NEJ0 188 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 ADAMTS18Q8TE60 1221 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 TP53INP1Q96A56 240 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 SNX18Q96RF0 628 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 WACQ9BTA9 647 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 TPSD1Q9BZJ3 242 aa19.98■□□□□ 0.79
SHMT1-202ENST00000352886 RANGRFQ9HD47 186 aaPredicted RBP19.98■□□□□ 0.79
SHMT1-202ENST00000352886 ZNF749O43361 778 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 FAM157BP0CG42 384 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 TALDO1P37837 337 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 CAPZA2P47755 286 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 FASLGP48023 281 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 MRPS15P82914 257 aaKnown RBP19.97■□□□□ 0.79
SHMT1-202ENST00000352886 GAS6Q14393 721 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 PRR23CQ6ZRP0 262 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 DEFB119Q8N690 84 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 ZNF615Q8N8J6 731 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 OR4M1Q8NGD0 313 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 LRFN5Q96NI6 719 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 LMF1Q96S06 567 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 CNN2Q99439 309 aaKnown RBP19.97■□□□□ 0.79
SHMT1-202ENST00000352886 BEX2Q9BXY8 128 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 KLHL21Q9UJP4 597 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 ICAM5Q9UMF0 924 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 A0A0C4DFX4 3053 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 A0A0G2JK05 382 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 GLULP15104 373 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 MLLT3P42568 568 aaPredicted RBP19.97■□□□□ 0.79
SHMT1-202ENST00000352886 OR51Q1Q8NH59 317 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 FYTTD1Q96QD9 318 aaKnown RBP19.97■□□□□ 0.79
SHMT1-202ENST00000352886 SLC38A3Q99624 504 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 TTYH2Q9BSA4 534 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 HDHD2Q9H0R4 259 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 SOHLH2Q9NX45 425 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 PCDH15Q96QU1 1955 aa19.97■□□□□ 0.79
SHMT1-202ENST00000352886 A0A1B0GVC2 190 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 A6NIN4 97 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 TPD52L2O43399 206 aaKnown RBP19.96■□□□□ 0.79
SHMT1-202ENST00000352886 PAHP00439 452 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 OR2T7P0C7T2 308 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 ELOCQ15369 112 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 SLC25A35Q3KQZ1 300 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 MS4A15Q8N5U1 240 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 GATSQ8NAP1 163 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 POMGNT2Q8NAT1 580 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 OR2T27Q8NH04 317 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 C3orf49Q96BT1 292 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 UPRTQ96BW1 309 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 PELI1Q96FA3 418 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 ZNF578Q96N58 590 aaPredicted RBP19.96■□□□□ 0.79
SHMT1-202ENST00000352886 NMNAT3Q96T66 252 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 S100A1P23297 94 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 GABRA4P48169 554 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 GFERP55789 205 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 HSD17B7P56937 341 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 CCDC85BQ15834 202 aaPredicted RBP19.96■□□□□ 0.79
SHMT1-202ENST00000352886 DPY19L2P2Q6ZN68 376 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 LMX1AQ8TE12 382 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 ZNRF4Q8WWF5 429 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 TGM7Q96PF1 710 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 SMAD5Q99717 465 aaKnown RBP19.96■□□□□ 0.79
SHMT1-202ENST00000352886 PLCL2Q9UPR0 1127 aa19.96■□□□□ 0.79
SHMT1-202ENST00000352886 A0A1W2PPK0 400 aa19.95■□□□□ 0.78
SHMT1-202ENST00000352886 IMPA2O14732 288 aa19.95■□□□□ 0.78
SHMT1-202ENST00000352886 PPM1BO75688 479 aa19.95■□□□□ 0.78
SHMT1-202ENST00000352886 WNT1P04628 370 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms