RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ELOA3BQ3SY89 546 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 VASNQ6EMK4 673 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 CBLN3Q6UW01 205 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 DPY19L2P2Q6ZN68 376 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 KANSL1Q7Z3B3 1105 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 ATG4DQ86TL0 474 aaPredicted RBP18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 C9orf40Q8IXQ3 194 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 SYT14Q8NB59 555 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 GALNT6Q8NCL4 622 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 ELOA3Q8NG57 546 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 OR52E2Q8NGJ4 325 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 PIGKQ92643 395 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 ADOQ96SZ5 270 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 TBX5Q99593 518 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 KATNB1Q9BVA0 655 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 TMED9Q9BVK6 235 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 POLE4Q9NR33 117 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 PLEKHB1Q9UF11 243 aaPredicted RBP18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 FBXL4Q9UKA2 621 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 MKL2Q9ULH7 1088 aa18.63■□□□□ 0.57
CHRNA3-202ENST00000348639 SLC35F4A4IF30 521 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 LRRN3E7EW58 273 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 HIST1H1CP16403 213 aaKnown RBP18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 GTF2E2P29084 291 aaKnown RBP18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 POU4F2Q12837 409 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 ASB15Q8WXK1 588 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 TMEM43Q9BTV4 400 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 SLC7A5P2Q9GIP4 190 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 LRRN3Q9H3W5 708 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 SP140LQ9H930 580 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 COPS7AQ9UBW8 275 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 PILRBQ9UKJ0 227 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 SRPK3Q9UPE1 567 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 IER3IP1Q9Y5U9 82 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 FRYLO94915 3013 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 DMDP11532 3685 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 GABRPO00591 440 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 TO15178 435 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 HNRNPCP07910 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 CCR4P51679 360 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 RPS4XP62701 263 aaKnown RBP18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 SQSTM1Q13501 440 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 HLA-BQ31612 363 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 HLA-DQA1Q5Y7H0 255 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 PRR22Q8IZ63 422 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 FAM98AQ8NCA5 519 aaKnown RBP18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 PLPP5Q8NEB5 264 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 OR1N1Q8NGS0 311 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 DCLRE1CQ96SD1 692 aaKnown RBP18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 CCDC32Q9BV29 185 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 HDHD5Q9BXW7 423 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 SYNDIG1Q9H7V2 258 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 TRAPPC4Q9Y296 219 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 CMAHPQ9Y471 501 aa18.62■□□□□ 0.57
CHRNA3-202ENST00000348639 A0A1B0GTQ1 180 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 ICOSLGO75144 302 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 MRPL3P09001 348 aaKnown RBP18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 RPL4P36578 427 aaKnown RBP18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 PRPS1P60891 318 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 NR0B2Q15466 257 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 ZNF574Q6ZN55 896 aaPredicted RBP18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 LAX1Q8IWV1 398 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 SDR9C7Q8NEX9 313 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 OR4K13Q8NH42 304 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 LIPHQ8WWY8 451 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 SMPDL3BQ92485 455 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 SDHCQ99643 169 aaPredicted RBP18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 WWTR1Q9GZV5 400 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 LAT2Q9GZY6 243 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 TRIM36Q9NQ86 728 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 POLHQ9Y253 713 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 COL5A1P20908 1838 aaPredicted RBP18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 ARPC3O15145 178 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 SIGLEC6O43699 453 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 MT-ND5P03915 603 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 CFIP05156 583 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 GYPBP06028 91 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 IL12BP29460 328 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 NR0B1P51843 470 aaKnown RBP18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 CDC20Q12834 499 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 ISXQ2M1V0 245 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 RHBDD2Q6NTF9 364 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 SHISA6Q6ZSJ9 500 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 WDR5BQ86VZ2 330 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 GPALPP1Q8IXQ4 340 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 SAP25Q8TEE9 199 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 NRSN2Q9GZP1 204 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 NRIP3Q9NQ35 241 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 CTSFQ9UBX1 484 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 SUSD2Q9UGT4 822 aa18.61■□□□□ 0.57
CHRNA3-202ENST00000348639 WDR87Q6ZQQ6 2873 aa18.6■□□□□ 0.57
CHRNA3-202ENST00000348639 ADAMTS20P59510 1910 aa18.6■□□□□ 0.57
CHRNA3-202ENST00000348639 OR6C76A6NM76 312 aa18.6■□□□□ 0.57
CHRNA3-202ENST00000348639 RNF13O43567 381 aa18.6■□□□□ 0.57
CHRNA3-202ENST00000348639 TSPAN2O60636 221 aa18.6■□□□□ 0.57
CHRNA3-202ENST00000348639 ACTC1P68032 377 aa18.6■□□□□ 0.57
CHRNA3-202ENST00000348639 ACTA1P68133 377 aa18.6■□□□□ 0.57
CHRNA3-202ENST00000348639 COX15Q7KZN9 410 aa18.6■□□□□ 0.57
CHRNA3-202ENST00000348639 SLC29A4Q7RTT9 530 aa18.6■□□□□ 0.57
CHRNA3-202ENST00000348639 MARCH9Q86YJ5 346 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms