RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SGTBQ96EQ0 304 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 DMRTB1Q96MA1 342 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 DDOQ99489 341 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 KLHDC3Q9BQ90 382 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 TP63Q9H3D4 680 aaPredicted RBP14.15□□□□□ -0.14
UPF3B-202ENST00000345865 TMEM165Q9HC07 324 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 EXTL2Q9UBQ6 330 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 NUFIP1Q9UHK0 495 aaKnown RBP14.15□□□□□ -0.14
UPF3B-202ENST00000345865 RASD1Q9Y272 281 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 IGKV1D-42A0A075B6H8 117 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 HMX3A6NHT5 357 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 C4orf47A7E2U8 309 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 EFCAB7A8K855 629 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 IFNGP01579 166 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 NME1P15531 152 aaKnown RBP14.15□□□□□ -0.14
UPF3B-202ENST00000345865 CD53P19397 219 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 DDOSTP39656 456 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 MAP2K3P46734 347 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 CD226Q15762 336 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 BCL2A1Q16548 175 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 SLC25A35Q3KQZ1 300 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 KLHL26Q53HC5 615 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 SFXN4Q6P4A7 337 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 LYPD4Q6UWN0 246 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 ABCA7Q8IZY2 2146 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 NPEPL1Q8NDH3 523 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 C19orf18Q8NEA5 215 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 SLC35B4Q969S0 331 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 FRMD6Q96NE9 622 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 UBL7Q96S82 380 aaPredicted RBP14.15□□□□□ -0.14
UPF3B-202ENST00000345865 NMNAT3Q96T66 252 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 SLC38A3Q99624 504 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 MKKSQ9NPJ1 570 aaPredicted RBP14.15□□□□□ -0.14
UPF3B-202ENST00000345865 ENAMQ9NRM1 1142 aa14.15□□□□□ -0.14
UPF3B-202ENST00000345865 ASXL3Q9C0F0 2248 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 A0A1W2PPK0 400 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 A0A1W2PR77 199 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 A0A1W2PRG6 482 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 ZNF749O43361 778 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 LANCL1O43813 399 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 PTBP1P26599 531 aaKnown RBP eCLIP14.14□□□□□ -0.15
UPF3B-202ENST00000345865 CD1CP29017 333 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 HOXD12P35452 270 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 MLLT3P42568 568 aaPredicted RBP14.14□□□□□ -0.15
UPF3B-202ENST00000345865 KCNAB1Q14722 419 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 ACSM3Q53FZ2 586 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 COL13A1Q5TAT6 717 aaPredicted RBP14.14□□□□□ -0.15
UPF3B-202ENST00000345865 NKAIN2Q5VXU1 208 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 APOOLQ6UXV4 268 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 SYT9Q86SS6 491 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 OR4M1Q8NGD0 313 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 ENKURQ8TC29 256 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 ACOT12Q8WYK0 555 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 SLC7A6Q92536 515 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 PELI1Q96FA3 418 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 CYSLTR2Q9NS75 346 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 RBFOX1Q9NWB1 397 aaKnown RBP14.14□□□□□ -0.15
UPF3B-202ENST00000345865 SDK1Q7Z5N4 2213 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 OR6C68A6NDL8 312 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 LYRM1O43325 122 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 SLC19A2O60779 497 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 PSKH1P11801 424 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 GPR143P51810 404 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 HSD17B7P56937 341 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 SKP1P63208 163 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 ELOCQ15369 112 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.14□□□□□ -0.15
UPF3B-202ENST00000345865 CBLN3Q6UW01 205 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 MED25Q71SY5 747 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 CMIPQ8IY22 773 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 ZNF687Q8N1G0 1237 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 TSTD1Q8NFU3 115 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 RASD2Q96D21 266 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 CLIP3Q96DZ5 547 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 MOV10Q9HCE1 1003 aaKnown RBP14.14□□□□□ -0.15
UPF3B-202ENST00000345865 KLHL1Q9NR64 748 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 SOHLH2Q9NX45 425 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 NLKQ9UBE8 527 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 COPS3Q9UNS2 423 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 PLCL2Q9UPR0 1127 aa14.14□□□□□ -0.15
UPF3B-202ENST00000345865 RPL4P36578 427 aaKnown RBP14.13□□□□□ -0.15
UPF3B-202ENST00000345865 PPM1FP49593 454 aaPredicted RBP14.13□□□□□ -0.15
UPF3B-202ENST00000345865 NRG3P56975 720 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 TAS2R43P59537 309 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 ACTC1P68032 377 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 ACTA1P68133 377 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 DEFB133Q30KQ1 61 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 FNDC7Q5VTL7 733 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 SLC7A5P1Q8MH63 180 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 SAMD12Q8N8I0 201 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 DUSP18Q8NEJ0 188 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 MOSPD2Q8NHP6 518 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 PTPMT1Q8WUK0 201 aaPredicted RBP14.13□□□□□ -0.15
UPF3B-202ENST00000345865 UPRTQ96BW1 309 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 ZC3HAV1LQ96H79 300 aaKnown RBP14.13□□□□□ -0.15
UPF3B-202ENST00000345865 FYTTD1Q96QD9 318 aaKnown RBP14.13□□□□□ -0.15
UPF3B-202ENST00000345865 BEX2Q9BXY8 128 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 RANGRFQ9HD47 186 aaPredicted RBP14.13□□□□□ -0.15
UPF3B-202ENST00000345865 NRIP3Q9NQ35 241 aa14.13□□□□□ -0.15
UPF3B-202ENST00000345865 RP1P56715 2156 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms