RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 TRIQKQ629K1 86 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 ZNF321PQ8N8H1 164 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 C17orf50Q8WW18 174 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 ZNRF4Q8WWF5 429 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 INPP5EQ9NRR6 644 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 ABCA7Q8IZY2 2146 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 SERINC4A6NH21 518 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 CHURC1-FNTBB4DL54 471 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 SOX30O94993 753 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 GLULP15104 373 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 GALP22466 123 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 RPL4P36578 427 aaKnown RBP17.76■□□□□ 0.43
COL9A3-201ENST00000343916 FNTBP49356 437 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 FUT7Q11130 342 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 LCN1P1Q5VSP4 162 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 MZT2AQ6P582 158 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 CEACAM19Q7Z692 300 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 C19orf18Q8NEA5 215 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 OR6C4Q8NGE1 309 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 PGLYRP3Q96LB9 341 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 MKKSQ9NPJ1 570 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-201ENST00000343916 BAIAP2Q9UQB8 552 aa17.76■□□□□ 0.43
COL9A3-201ENST00000343916 A0A0B4J293 547 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 A0A1W2PPK0 400 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 A0A1W2PRG6 482 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 SERPINI2O75830 405 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 NDUFB2O95178 105 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 IFNGP01579 166 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 GPALPP1Q8IXQ4 340 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 ZNF615Q8N8J6 731 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 ABHD4Q8TB40 342 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 ZPLD1Q8TCW7 415 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 RNF31Q96EP0 1072 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 SGTBQ96EQ0 304 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 FYTTD1Q96QD9 318 aaKnown RBP17.75■□□□□ 0.43
COL9A3-201ENST00000343916 NMNAT3Q96T66 252 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 RANGRFQ9HD47 186 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-201ENST00000343916 KLHL1Q9NR64 748 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 NUFIP1Q9UHK0 495 aaKnown RBP17.75■□□□□ 0.43
COL9A3-201ENST00000343916 A0A087WUJ7 227 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 CLPSP04118 112 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 NME1P15531 152 aaKnown RBP17.75■□□□□ 0.43
COL9A3-201ENST00000343916 F8A1P23610 371 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 ENKURQ8TC29 256 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 LMAN1LQ9HAT1 526 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 HAO2Q9NYQ3 351 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 EXTL2Q9UBQ6 330 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 SERTAD3Q9UJW9 196 aa17.75■□□□□ 0.43
COL9A3-201ENST00000343916 ASXL3Q9C0F0 2248 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 A8MUA0 341 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 SCO2O43819 266 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 CD38P28907 300 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 CD1CP29017 333 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 CD226Q15762 336 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 LYPD4Q6UWN0 246 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 MED25Q71SY5 747 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 RDH10Q8IZV5 341 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 ZSCAN1Q8NBB4 408 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 GHSRQ92847 366 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 CA14Q9ULX7 337 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 PLCL2Q9UPR0 1127 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 A0A0G2JMP0 313 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 A0A0X1KG70 313 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 C4orf47A7E2U8 309 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 C17orf105B2RV13 164 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 ZNF749O43361 778 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 PAHP00439 452 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 CFL1P23528 166 aaKnown RBP17.74■□□□□ 0.43
COL9A3-201ENST00000343916 CCR4P51679 360 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 GPR143P51810 404 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 SNAP47Q5SQN1 464 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 HBMQ6B0K9 141 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 OR4M2Q8NGB6 313 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 C3orf49Q96BT1 292 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 TTYH1Q9H313 450 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-201ENST00000343916 PNO1Q9NRX1 252 aaKnown RBP17.74■□□□□ 0.43
COL9A3-201ENST00000343916 RASD1Q9Y272 281 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 SPAG17Q6Q759 2223 aa17.74■□□□□ 0.43
COL9A3-201ENST00000343916 HMX3A6NHT5 357 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 PSKH1P11801 424 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 MYL9P24844 172 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 OR1D4P47884 311 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 HSD17B7P56937 341 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 PRAMEF17Q5VTA0 474 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 CBLN3Q6UW01 205 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 SYT9Q86SS6 491 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 GKN2Q86XP6 184 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 RASD2Q96D21 266 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 EVA1AQ9H8M9 152 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 RNF121Q9H920 327 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 EFCAB7A8K855 629 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 OIP5O43482 229 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 GUSBP08236 651 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 ALAS2P22557 587 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 THBS2P35442 1172 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 MAP2K3P46734 347 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 SLC25A35Q3KQZ1 300 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 ACSM3Q53FZ2 586 aa17.73■□□□□ 0.43
COL9A3-201ENST00000343916 DMKNQ6E0U4 476 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-201ENST00000343916 SFXN4Q6P4A7 337 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms