RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 PLEKHB1Q9UF11 243 aaPredicted RBP13.93□□□□□ -0.18
BRAT1-201ENST00000340611 PFDN2Q9UHV9 154 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 FBXO4Q9UKT5 387 aa13.93□□□□□ -0.18
BRAT1-201ENST00000340611 RIF1Q5UIP0 2472 aaKnown RBP13.92□□□□□ -0.18
BRAT1-201ENST00000340611 A0A1B0GVC2 190 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 IQCMA0A1B0GVH7 501 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 A6NIN4 97 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 RNASET2O00584 256 aaKnown RBP13.92□□□□□ -0.18
BRAT1-201ENST00000340611 TPST2O60704 377 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 RLN2P04090 185 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 XCR1P46094 333 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 PRKAG1P54619 331 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 CTBP2P56545 445 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 FOXL2P58012 376 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 SHC2P98077 582 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 CCDC157Q569K6 752 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 GCNT6Q5T4J0 391 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 PYHIN1Q6K0P9 492 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 RBMS3Q6XE24 437 aaKnown RBP13.92□□□□□ -0.18
BRAT1-201ENST00000340611 CAMKMTQ7Z624 323 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 NT5CQ8TCD5 201 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 SLC25A46Q96AG3 418 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 NARS2Q96I59 477 aaKnown RBP13.92□□□□□ -0.18
BRAT1-201ENST00000340611 SFXN2Q96NB2 322 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 ZFHX2Q9C0A1 2572 aaPredicted RBP13.92□□□□□ -0.18
BRAT1-201ENST00000340611 SLC35F4A4IF30 521 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 PTAFRP25105 342 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 RAB13P51153 203 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 LIM2P55344 173 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 IQCF1Q8N6M8 205 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 TCEANCQ8N8B7 351 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 OR2T4Q8NH00 348 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 GLIPR2Q9H4G4 154 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 SLC25A19Q9HC21 320 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 NUDT15Q9NV35 164 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 GPR160Q9UJ42 338 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 TMEM184BQ9Y519 407 aaPredicted RBP13.92□□□□□ -0.18
BRAT1-201ENST00000340611 CDH10Q9Y6N8 788 aa13.92□□□□□ -0.18
BRAT1-201ENST00000340611 FER1L5A0AVI2 2057 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 TRABD2BA6NFA1 517 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 FAM157BP0CG42 384 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 NCBP2P52298 156 aaKnown RBP eCLIP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ZSWIM7Q19AV6 140 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 SFRP5Q5T4F7 317 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ANXA8L1Q5VT79 327 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 TNFAIP8L2Q6P589 184 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ZNF574Q6ZN55 896 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 OVCH2Q7RTZ1 564 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 HMGN2P46Q86SG4 172 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ZNF565Q8N9K5 539 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 OR2T35Q8NGX2 323 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 GOT1L1Q8NHS2 421 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ADAMTS14Q8WXS8 1223 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 KAT2AQ92830 837 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ELP4Q96EB1 424 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 SDHAF3Q9NRP4 125 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 NDUFB11Q9NX14 153 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 BTNL2Q9UIR0 455 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 A0A1W2PQM1 296 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 SMIM10L1P0DMW3 83 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 FOLR1P15328 257 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 CHI3L1P36222 383 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 MPLP40238 635 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 CDK6Q00534 326 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 IKBIPQ70UQ0 350 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 OR4C6Q8NH72 309 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 MOSPD2Q8NHP6 518 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 NSMAFQ92636 917 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 RAB8BQ92930 207 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 SMIM10Q96HG1 83 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 BBS4Q96RK4 519 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 TSSK6Q9BXA6 273 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 NLGN3Q9NZ94 848 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 DHCR7Q9UBM7 475 aaKnown RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 TLCD2A6NGC4 264 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 HYAL3O43820 417 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ACAA1P09110 424 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ZNF3P17036 446 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 PPIBP23284 216 aaKnown RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 CCL7P80098 99 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 LRRC74AQ0VAA2 488 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 RNASE12Q5GAN4 147 aaKnown RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 GEMIN6Q8WXD5 167 aaKnown RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 C1GALT1C1Q96EU7 318 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 MRPL48Q96GC5 212 aaKnown RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 C10orf90Q96M02 699 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 DPYSL5Q9BPU6 564 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 MND1Q9BWT6 205 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ZNF436Q9C0F3 470 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 SIRT3Q9NTG7 399 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 ADAM29Q9UKF5 820 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 DAPP1Q9UN19 280 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 CORO2BQ9UQ03 480 aa13.91□□□□□ -0.18
BRAT1-201ENST00000340611 SPIN1Q9Y657 262 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-201ENST00000340611 DUX1O43812 170 aa13.9□□□□□ -0.18
BRAT1-201ENST00000340611 B3GALT2O43825 422 aa13.9□□□□□ -0.18
BRAT1-201ENST00000340611 MPZL2O60487 215 aa13.9□□□□□ -0.18
BRAT1-201ENST00000340611 AVPR1BP47901 424 aa13.9□□□□□ -0.18
BRAT1-201ENST00000340611 LIMS1P48059 325 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms