RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RPL5P46777 297 aaKnown RBP11.82□□□□□ -0.52
LIN54-201ENST00000340417 PIGFQ07326 219 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 BLMHQ13867 455 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 C1orf140Q5VVS0 124 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 FAM205BPQ63HN1 556 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 GPR155Q7Z3F1 870 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 D2HGDHQ8N465 521 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 CST11Q9H112 138 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 UCK1Q9HA47 277 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 ELOVL3Q9HB03 270 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 CHRNA9Q9UGM1 479 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 ZNF432O94892 652 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 ABHD16AO95870 558 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 PNLIPRP2P54317 469 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 AQP4P55087 323 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 MC2RQ01718 297 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 SLC35F2Q8IXU6 374 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 IQCF1Q8N6M8 205 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 NPRL2Q8WTW4 380 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 ZMYND19Q96E35 227 aaPredicted RBP11.82□□□□□ -0.52
LIN54-201ENST00000340417 GINS4Q9BRT9 223 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 URM1Q9BTM9 101 aaKnown RBP11.82□□□□□ -0.52
LIN54-201ENST00000340417 AKR7A3O95154 331 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 PLGLAQ15195 96 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 PLCXD3Q63HM9 321 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 BEST3Q8N1M1 668 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 ARMC10Q8N2F6 343 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 ZNF300Q96RE9 604 aaPredicted RBP11.82□□□□□ -0.52
LIN54-201ENST00000340417 ZNF99A8MXY4 864 aaPredicted RBP11.82□□□□□ -0.52
LIN54-201ENST00000340417 CD3GP09693 182 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 PITPNAQ00169 270 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 ST3GAL4Q11206 333 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 MICAQ29983 383 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 GPALPP1Q8IXQ4 340 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 CSF3RQ99062 836 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 NUDT9Q9BW91 350 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 PMF1-BGLAPU3KQ54 211 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 TNFSF11O14788 317 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 PLOD3O60568 738 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 CTSVO60911 334 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 WNT1P04628 370 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 ZNF12P17014 697 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 EIF2S3P41091 472 aaKnown RBP11.82□□□□□ -0.52
LIN54-201ENST00000340417 TSTQ16762 297 aaKnown RBP11.82□□□□□ -0.52
LIN54-201ENST00000340417 LHFPL3Q86UP9 236 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 TTC9Q92623 222 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 HES7Q9BYE0 225 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 COMMD3Q9UBI1 195 aa11.82□□□□□ -0.52
LIN54-201ENST00000340417 IGLV3-16A0A075B6K0 115 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 A0A087WZY1 265 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 OR5H15A6NDH6 313 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 TVP23AA6NH52 213 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 NME4O00746 187 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 GSTT2BP0CG30 244 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 OSMP13725 252 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 SOX8P57073 446 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 SLCO6A1Q86UG4 719 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 ZNF547Q8IVP9 402 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 CPEB3Q8NE35 698 aaKnown RBP11.81□□□□□ -0.52
LIN54-201ENST00000340417 OR7G2Q8NG99 324 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 OR9Q2Q8NGE9 314 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 NXF5Q9H1B4 397 aaKnown RBP11.81□□□□□ -0.52
LIN54-201ENST00000340417 KCNJ16Q9NPI9 418 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 ZNF226Q9NYT6 803 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 HSD17B1P14061 328 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 FAPQ12884 760 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 FCRL6Q6DN72 434 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 ACBD7Q8N6N7 88 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 GTF2H4Q92759 462 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 CLEC4MQ9H2X3 399 aaPredicted RBP11.81□□□□□ -0.52
LIN54-201ENST00000340417 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 A0A1B0GWA3 101 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 STSP08842 583 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 CHRNB4P30926 498 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 DUSP2Q05923 314 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 PSMA8Q8TAA3 256 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 INTS12Q96CB8 462 aaKnown RBP11.81□□□□□ -0.52
LIN54-201ENST00000340417 SLC45A3Q96JT2 553 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 KAT8Q9H7Z6 458 aaKnown RBP11.81□□□□□ -0.52
LIN54-201ENST00000340417 NUFIP1Q9UHK0 495 aaKnown RBP11.81□□□□□ -0.52
LIN54-201ENST00000340417 PRAMEF27A3QJZ7 478 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 POU3F3P20264 500 aaPredicted RBP11.81□□□□□ -0.52
LIN54-201ENST00000340417 NR4A1P22736 598 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 Q6ZSR9 355 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 TMPRSS7Q7RTY8 843 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 HS3ST5Q8IZT8 346 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 PIGCQ92535 297 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 ABCB10Q9NRK6 738 aa11.81□□□□□ -0.52
LIN54-201ENST00000340417 PAK1IP1Q9NWT1 392 aaPredicted RBP11.81□□□□□ -0.52
LIN54-201ENST00000340417 LRRC30A6NM36 301 aa11.8□□□□□ -0.52
LIN54-201ENST00000340417 TNFRSF21O75509 655 aa11.8□□□□□ -0.52
LIN54-201ENST00000340417 CRYAAP02489 173 aa11.8□□□□□ -0.52
LIN54-201ENST00000340417 EMP3P54852 163 aa11.8□□□□□ -0.52
LIN54-201ENST00000340417 SLC35D2Q76EJ3 337 aa11.8□□□□□ -0.52
LIN54-201ENST00000340417 C11orf40Q8WZ69 217 aa11.8□□□□□ -0.52
LIN54-201ENST00000340417 KISS1RQ969F8 398 aaPredicted RBP11.8□□□□□ -0.52
LIN54-201ENST00000340417 VSX1Q9NZR4 365 aaPredicted RBP11.8□□□□□ -0.52
LIN54-201ENST00000340417 FBXO9Q9UK97 447 aaPredicted RBP11.8□□□□□ -0.52
LIN54-201ENST00000340417 SIPA1L1O43166 1804 aa11.8□□□□□ -0.52
LIN54-201ENST00000340417 SPAG17Q6Q759 2223 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms