RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 EIF2B5Q13144 721 aaKnown RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 EFR3AQ14156 821 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 TATDN3Q17R31 274 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 AMZ1Q400G9 498 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 DCST2Q5T1A1 773 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 ZNF767PQ75MW2 155 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 LHFPL3Q86UP9 236 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 CPOQ8IVL8 374 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 CMIPQ8IY22 773 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 LSMEM1Q8N8F7 131 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 POMGNT2Q8NAT1 580 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 SNIP1Q8TAD8 396 aaKnown RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 RPS4Y2Q8TD47 263 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 ADAMTS18Q8TE60 1221 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 TMEM255BQ8WV15 326 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 TMEM203Q969S6 136 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 MRPL48Q96GC5 212 aaKnown RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 SAMD8Q96LT4 415 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 WDR92Q96MX6 357 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 BBC3Q96PG8 261 aaPredicted RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 TIMP4Q99727 224 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 NRTNQ99748 197 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 LMF2Q9BU23 707 aaKnown RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 MRI1Q9BV20 369 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 DUSP23Q9BVJ7 150 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 QRSL1Q9H0R6 528 aaKnown RBP9.93□□□□□ -0.82
RTN3-201ENST00000338850 FGF22Q9HCT0 170 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 SLC7A7Q9UM01 511 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 SIGLEC7Q9Y286 467 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 MED31Q9Y3C7 131 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 CSNK1G3Q9Y6M4 447 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 MAU2Q9Y6X3 613 aa9.93□□□□□ -0.82
RTN3-201ENST00000338850 CELSR3Q9NYQ7 3312 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 PTPRQQ9UMZ3 2332 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 SHISA3A0PJX4 238 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 OR52A4PA6NMU1 304 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 RIIAD1A6NNX1 92 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 PRR23D1E9PI22 279 aaPredicted RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 ARHGEF9O43307 516 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 PIP5K1CO60331 668 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 FCMRO60667 390 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 PTP4A3O75365 173 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 GATBO75879 557 aaKnown RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 GP1BAP07359 652 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 SBK2P0C263 348 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 PRR23D2P0DMB1 279 aaPredicted RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 C8orf89P0DMQ9 161 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 SAGP10523 405 aaPredicted RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 PEPDP12955 493 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 ARSBP15848 533 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 ZNF3P17036 446 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 TYRP1P17643 537 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 DRD5P21918 477 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 HTR2AP28223 471 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 SLC6A6P31641 620 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 TGM4P49221 684 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 DUSP3P51452 185 aaPredicted RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 NKX2-5P52952 324 aaPredicted RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 YPEL5P62699 121 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 ACTA2P62736 377 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 ACTG2P63267 376 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 C19orf57Q0VDD7 668 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 MAB21L1Q13394 359 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 IL10RAQ13651 578 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 IL18Q14116 193 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 OR1Q1Q15612 314 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 LTB4RQ15722 352 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 CARTPTQ16568 116 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 ZNF750Q32MQ0 723 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 ZNF791Q3KP31 576 aaPredicted RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 PLA1AQ53H76 456 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 CLEC12AQ5QGZ9 265 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 CCNJQ5T5M9 372 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 MRPL2Q5T653 305 aaKnown RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 DMKNQ6E0U4 476 aaPredicted RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 THOC7Q6I9Y2 204 aaKnown RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 FBXO42Q6P3S6 717 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 ZNF782Q6ZMW2 699 aaPredicted RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 CREB3L2Q70SY1 520 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 OLIG3Q7RTU3 272 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 KLBQ86Z14 1044 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 GHDCQ8N2G8 530 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 FAM109AQ8N4B1 249 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 KAT2AQ92830 837 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 RFT1Q96AA3 541 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 ZG16BQ96DA0 208 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 SENP5Q96HI0 755 aaPredicted RBP9.92□□□□□ -0.82
RTN3-201ENST00000338850 TRIM2Q9C040 744 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 NDEL1Q9GZM8 345 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 MMP28Q9H239 520 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 SRMSQ9H3Y6 488 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 SYNPO2LQ9H987 977 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 B3GAT2Q9NPZ5 323 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 EQTNQ9NQ60 294 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 POT1Q9NUX5 634 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 COMMD3Q9UBI1 195 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 IL20RAQ9UHF4 553 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 ALG5Q9Y673 324 aa9.92□□□□□ -0.82
RTN3-201ENST00000338850 A0A0G2JK05 382 aa9.91□□□□□ -0.82
RTN3-201ENST00000338850 DAPL1A0PJW8 107 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms