RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ARL9Q6T311 187 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 C9orf40Q8IXQ3 194 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 OR6K6Q8NGW6 343 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 C9orf43Q8TAL5 461 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-201ENST00000336180 LMF2Q9BU23 707 aaKnown RBP11.53□□□□□ -0.56
LIMK1-201ENST00000336180 GAREM1Q9H706 876 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 TXNL4BQ9NX01 149 aaKnown RBP11.53□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF229Q9UJW7 825 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 AHCTF1Q8WYP5 2266 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 SHISA3A0PJX4 238 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 BHLHE40O14503 412 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 CRYZL1O95825 349 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 AQP2P41181 271 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 MAGEB1P43366 347 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 HSD17B7P56937 341 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 COPZ1P61923 177 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 SPATC1Q76KD6 591 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 KDM8Q8N371 416 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 PROKR2Q8NFJ6 384 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 KBTBD8Q8NFY9 601 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 DNASE2BQ8WZ79 361 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 SLC25A36Q96CQ1 311 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 DUSP15Q9H1R2 295 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-201ENST00000336180 CLEC4AQ9UMR7 237 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 IDSB3KWA1 339 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 PRR23D1E9PI22 279 aaPredicted RBP11.52□□□□□ -0.56
LIMK1-201ENST00000336180 C11orf98E9PRG8 122 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 ALOX12BO75342 701 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 PRR23D2P0DMB1 279 aaPredicted RBP11.52□□□□□ -0.56
LIMK1-201ENST00000336180 BTF3P20290 206 aaKnown RBP11.52□□□□□ -0.56
LIMK1-201ENST00000336180 SDHBP21912 280 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 CD40LGP29965 261 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 PYCR1P32322 319 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 FUT7Q11130 342 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 PRPF38BQ5VTL8 546 aaKnown RBP11.52□□□□□ -0.56
LIMK1-201ENST00000336180 MEDAGQ5VYS4 303 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 PWWP2BQ6NUJ5 590 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 IL20RBQ6UXL0 311 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 LINC00471Q8N535 108 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 PARP16Q8N5Y8 322 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 OR4C6Q8NH72 309 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 CEP19Q96LK0 163 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.52□□□□□ -0.56
LIMK1-201ENST00000336180 SERTAD3Q9UJW9 196 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 SSR3Q9UNL2 185 aa11.52□□□□□ -0.56
LIMK1-201ENST00000336180 KIF26BQ2KJY2 2108 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 KDM4EB2RXH2 506 aaPredicted RBP11.52□□□□□ -0.57
LIMK1-201ENST00000336180 CHP2O43745 196 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 NUDT21O43809 227 aaKnown RBP11.52□□□□□ -0.57
LIMK1-201ENST00000336180 DDAH2O95865 285 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 PIPP12273 146 aaPredicted RBP11.52□□□□□ -0.57
LIMK1-201ENST00000336180 SPNP16150 400 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 MST1P26927 711 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 SKP1P63208 163 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 E2F1Q01094 437 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 RHAGQ02094 409 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 FGFBP1Q14512 234 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 TP53I3Q53FA7 332 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 NIPAL3Q6P499 406 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 TIGARQ9NQ88 270 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 FUOMA2VDF0 154 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 H3BMH7 237 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 NUDT1P36639 197 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 PSMB10P40306 273 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 RPS5P46782 204 aaKnown RBP11.52□□□□□ -0.57
LIMK1-201ENST00000336180 OR12D2P58182 307 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 PRKCDQ05655 676 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 KLHL22Q53GT1 634 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 HLA-DQA1Q5Y7H0 255 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 OR8H2Q8N162 312 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF501Q96CX3 271 aaPredicted RBP11.52□□□□□ -0.57
LIMK1-201ENST00000336180 NEURL2Q9BR09 285 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 OCIAD1Q9NX40 245 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 COMMD3Q9UBI1 195 aa11.52□□□□□ -0.57
LIMK1-201ENST00000336180 ING1Q9UK53 422 aaPredicted RBP11.52□□□□□ -0.57
LIMK1-201ENST00000336180 TECTAO75443 2155 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 DAPL1A0PJW8 107 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 ELOA3DA6NLF2 546 aaPredicted RBP11.51□□□□□ -0.57
LIMK1-201ENST00000336180 SCDO00767 359 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 ELOA3BQ3SY89 546 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 CEP78Q5JTW2 689 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 MARCH9Q86YJ5 346 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 GJD3Q8N144 294 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 POC5Q8NA72 575 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 ELOA3Q8NG57 546 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 STT3BQ8TCJ2 826 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 C3orf49Q96BT1 292 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 KTI12Q96EK9 354 aaPredicted RBP11.51□□□□□ -0.57
LIMK1-201ENST00000336180 Q96M85 177 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 GALNT9Q9HCQ5 603 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 KNTC1P50748 2209 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 PRRC2CQ9Y520 2896 aaKnown RBP11.51□□□□□ -0.57
LIMK1-201ENST00000336180 CBFA2T3O75081 653 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 IL12BP29460 328 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 PLCXD2Q0VAA5 305 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 RAB40BQ12829 278 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 ODF4Q2M2E3 257 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 STEAP3Q658P3 488 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 ZCCHC12Q6PEW1 402 aa11.51□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF721Q8TF20 911 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms