RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 GGT3PA6NGU5 568 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 FGF17O60258 216 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 CER1O95813 267 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 BMP4P12644 408 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 CCDC58Q4VC31 144 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 CHST8Q9H2A9 424 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 NT5DC2Q9H857 520 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 POLHQ9Y253 713 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 CACNG2Q9Y698 323 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 CDHR4A6H8M9 788 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 ACOD1A6NK06 481 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 RAD51DO75771 328 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 MT-ND4P03905 459 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 SPOCK1Q08629 439 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 FIP1L1Q6UN15 594 aaKnown RBP12.06□□□□□ -0.48
VSTM4-202ENST00000332853 TMEM205Q6UW68 189 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 OR5J2Q8NH18 312 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 TBC1D15Q8TC07 691 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 BORCS8Q96FH0 119 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 LCORQ96JN0 433 aaPredicted RBP12.06□□□□□ -0.48
VSTM4-202ENST00000332853 DPCDQ9BVM2 203 aaPredicted RBP12.06□□□□□ -0.48
VSTM4-202ENST00000332853 ZNF442Q9H7R0 627 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 GJE1A6NN92 205 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 ST6GAL1P15907 406 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 SIMC1Q8NDZ2 872 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 OR51T1Q8NGJ9 327 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 SUN5Q8TC36 379 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 SLC6A20Q9NP91 592 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 KCNS2Q9ULS6 477 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 SLC6A5Q9Y345 797 aa12.06□□□□□ -0.48
VSTM4-202ENST00000332853 PPM1DO15297 605 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 CTNSO60931 367 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 HTR3BO95264 441 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 CD79AP11912 226 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 MYF5P13349 255 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 RBMXP38159 391 aaKnown RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 CLDN12P56749 244 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 ISL1P61371 349 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 TMPPEQ6ZT21 453 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 ANKRD53Q8N9V6 530 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 RASD2Q96D21 266 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 POTEKPQ9BYX7 375 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 TREM1Q9NP99 234 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 RDH8Q9NYR8 311 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 EEF1E1-BLOC1S5C9J1V9 151 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 GOSR2O14653 212 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 SIGLEC6O43699 453 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 CREBL2O60519 120 aaPredicted RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 MPIG6BO95866 241 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 CD1CP29017 333 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 DCDP81605 110 aaKnown RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 C9orf135Q5VTT2 229 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 CFAP77Q6ZQR2 320 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 ASCC1Q8N9N2 400 aaKnown RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 SLC7A13Q8TCU3 470 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 ALG5Q9Y673 324 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 LGI1O95970 557 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 SCG5P05408 212 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 CFL1P23528 166 aaKnown RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 GRK5P34947 590 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 MCCD1P59942 119 aaPredicted RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 MALLQ13021 153 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 FAM109BQ6ICB4 259 aaPredicted RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 RIMKLAQ8IXN7 391 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 RHOXF1Q8NHV9 184 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 PCDHB16Q9NRJ7 776 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 ZNF593O00488 134 aaPredicted RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 TNFRSF10CO14798 259 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 SEC14L2O76054 403 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 GNRHRP30968 328 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 C14orf28Q4W4Y0 310 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 BEND4Q6ZU67 534 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 PTOV1Q86YD1 416 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 MRGPRX3Q96LB0 322 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 CCNL2Q96S94 520 aaPredicted RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 RANBP3Q9H6Z4 567 aaPredicted RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 YBX2Q9Y2T7 364 aaKnown RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 V9GY05 133 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 RP2O75695 350 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 HTR3AP46098 478 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 BTG2P78543 158 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 STX12Q86Y82 276 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 ARHGAP9Q9BRR9 750 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 NXF5Q9H1B4 397 aaKnown RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 TXNL4BQ9NX01 149 aaKnown RBP12.05□□□□□ -0.48
VSTM4-202ENST00000332853 PLEK2Q9NYT0 353 aa12.05□□□□□ -0.48
VSTM4-202ENST00000332853 OR2W5A6NFC9 320 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 A6NLC8 198 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 FCMRO60667 390 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 CLEC2LP0C7M8 214 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 MAKP20794 623 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 SHC1P29353 583 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 CSNK1A1P48729 337 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 HYAL1Q12794 435 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 MRPL49Q13405 166 aaKnown RBP12.04□□□□□ -0.48
VSTM4-202ENST00000332853 ADPRMQ3LIE5 342 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 TMEM176BQ3YBM2 270 aaPredicted RBP12.04□□□□□ -0.48
VSTM4-202ENST00000332853 Q6ZS52 159 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 FAM174AQ8TBP5 190 aa12.04□□□□□ -0.48
VSTM4-202ENST00000332853 NAT6Q93015 286 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms